Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01367 ATGGATTCGATAAACTCGTTCAAAGGGTATGGCAAAGTGGACGAGGCAGAGCAGCAAGCCTTCCAGAAGAAGACTCGCAAGCGCCTCATCATACTCATAGTCTCCTCCATAGTCCTCATCGCCGTCATCATCGCCGCCGTCCTAGGCACCGTCCTACACAGCCGCCGTTCCTCTTCCTCTGGCCCCTCAACGGAGCTATCCCCGGTGTCCTCTCTGAGGGCCGTGTGCGAAGTCACCCAGTACCCAGAGTCGTGCATGTCGAGCATCTCGTCCCTCCCAGACTACTCCAACACCACCGACCCACACCTCCTCTTCAGCCTCTCCCTCCGCGTAGCCATTAACGAGCTCTCCAACCTCTCCCATTATCCTTTCAAGCTCCGTTCCTCCATCAAGGAACCCCGTCTCCAGAAAGCCATTGATGTCTGTGCTACGGTCCTCGCCGACGCTGTCGCCAATTTCAACGACTCCGTCTCCACCCTCGACGCCGCCGGCAAGCTACCATCTACCACCAAGATCAGTGACATTAAGACCTGGGTGAGCGCCGCCATCACCAACCAAGATACCTGCTTGGACGCCCTCGAGGAGGTTAATAACTCCACCGCCGCCAACGCCGCCCTCGAGGACATGAAAACCACCATGAAGAACTCCACGGAGTTCTCGAGCAACAGCCTGGCCATCGTGACGAGGATCCTGGGGCTGCTCTCCCAATTCAACAGCCCGGTGAACAGGCGGCGGCTTCTGGGGTTCCCGGAGTGGGTGGGGGCGGCGGAGAGGAGGCTGCTGCTGGATAATGGGAACACCGCGACGGGAACAACGACGCCGGATGCGGTGGTGGCGAGCGATGGGAGTGCGCAGTACAAGACGATAAAGGAGGCGGTGCTTGCCGTGAAGAAGAAGAGCGAGAAGAGATTCGTGATATATGTGAAGGCAGGGACTTATGTTGAGAACATTGATTTGGATAAGGACACTTGGAATGTGATGATCTACGGTGATGGAAGTGACAAGACCATCATATCCGGCAGCCGCAACTTCATCGACGGCACTCCCACTTTTGAGACTGCCACTTTCGCTGTGAAGGGAAAGGGTTTCATTGCAAAGGACATACGGTTCAAGAACACGGCAGGCGCAGACAAGCATCAGGCGGTGGCACTGCGATCAGGGGCGGACCAATCAGTGTTCTACAGGTGCTCGTTCGAGGGTTTCCAGGACACACTGTACGCCCATTCCAACAGGCAGTTCTACCGCGACTGCGACATCACCGGCACCATCGACTTCATCTTTGGCAATGCCGCAGTGGTCTTCCAGAACTGCAAGATCATGCCACGTCAGCCTCTCCCCAACCAGTTCAACACCATAACCGCGCAGGGAAAGAAAGACCCCAACCAGAACACCGGCATCGTCATCCAGAAATGCTCCTTCTCTGCCTTCGCCAGTGATCTTCAGGCCCCTACCTACCTTGGCCGCCCTTGGAAGGATTTTTCCACCACCGTCATCATGCAGTCCGATATCGCCTCCTTCTTGAAGCCCGTGGGCTGGATAAGCTGGGTTGCCAATGTCGATCCACCAAAAACTATATTTTACGGTGAGTACCGCAACACTGGGCCTGGATCCGATGTCTCGCAACGGGTTAAGTGGGCTGGCTATAACCCCTCTCTAACTGAAACCGATGCTGTCAAATTCACAGTGCAGTCCTTTATTCAAGGCCCAGATTGGTTGCCAGATTCTGCTGTAAACTTTGACTCCACTCTCTGA 1752 0.5559 MDSINSFKGYGKVDEAEQQAFQKKTRKRLIILIVSSIVLIAVIIAAVLGTVLHSRRSSSSGPSTELSPVSSLRAVCEVTQYPESCMSSISSLPDYSNTTDPHLLFSLSLRVAINELSNLSHYPFKLRSSIKEPRLQKAIDVCATVLADAVANFNDSVSTLDAAGKLPSTTKISDIKTWVSAAITNQDTCLDALEEVNNSTAANAALEDMKTTMKNSTEFSSNSLAIVTRILGLLSQFNSPVNRRRLLGFPEWVGAAERRLLLDNGNTATGTTTPDAVVASDGSAQYKTIKEAVLAVKKKSEKRFVIYVKAGTYVENIDLDKDTWNVMIYGDGSDKTIISGSRNFIDGTPTFETATFAVKGKGFIAKDIRFKNTAGADKHQAVALRSGADQSVFYRCSFEGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCKIMPRQPLPNQFNTITAQGKKDPNQNTGIVIQKCSFSAFASDLQAPTYLGRPWKDFSTTVIMQSDIASFLKPVGWISWVANVDPPKTIFYGEYRNTGPGSDVSQRVKWAGYNPSLTETDAVKFTVQSFIQGPDWLPDSAVNFDSTL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01367 583 Pfam Plant invertase/pectin methylesterase inhibitor 71 226 IPR006501 GO:0004857
Aip06g01367 583 PANTHER PECTINESTERASE 1-RELATED 8 580 - -
Aip06g01367 583 PANTHER PECTINESTERASE 8 580 - -
Aip06g01367 583 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Aip06g01367 583 ProSitePatterns Pectinesterase signature 1. 300 319 IPR018040 -
Aip06g01367 583 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 228 IPR006501 GO:0004857
Aip06g01367 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 230 IPR035513 -
Aip06g01367 583 SMART PMEI_2 67 226 IPR006501 GO:0004857
Aip06g01367 583 SUPERFAMILY Pectin lyase-like 271 580 IPR011050 -
Aip06g01367 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 231 IPR035513 -
Aip06g01367 583 CDD PMEI-like_3 74 230 - -
Aip06g01367 583 Gene3D - 269 583 IPR012334 -
Aip06g01367 583 Pfam Pectinesterase 275 568 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01367 Aip-Chr6 21738023 21741847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01367 1 577 Carbohydrate Esterase AT1G53840 58.953 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01367 - - gmx:100777128 840.876