Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip06g01358 | ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGCGGCGGCGGTGACAGCTAGGTCTCGCCGGCTCACCGCGGAGTACCTGTGGCCTGACCTGAAGAAAGGCAGCTCAGGGAAGCGCGTGCCGAAGGCAGCGGTGATCGACCTCGACGATGATTTCGAGGCCGATTTCAGGGAATTCAAGGACGACTCCGACATCGACATTGACGACGATGAGGATGATGCCAAGCCCTTTGCTTTCGCCGCCGCCAAAGCTCCCAAGTCCATATCCCGTGGTGCTGGAAAATCTGTGGCGGTCAAAGCACAATCTGAGAAGTCTGCAAAGAGAAAGAGGAAGAATCAGTATAGGGGAATCCGTCAGCGTCCTTGGGGGAAATGGGCAGCTGAGATCCGTGATCCAAGAAAGGGTGTTCGTGTCTGGCTAGGAACCTTCAGCACTGCTGAAGAGGCTGCCAGAGCTTATGATGCTGAAGCACGGAGGATTCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCACCACGCACTCCTCCGAAACGTGCCAGGCCAAATCTGAATGCTGTTCAGCCCAATCTGAGTCATAAATTCAGTGTTGGTAACAATATGGAGAACTATGGTCCTCTGGATGGGTTTGAACAGAAACCACTGGTTAACCAGACTGCTAACATGGACTCCATTCCTGAGGGTGGAAATGGTTTCACATCCCTTACCTCACCTGATGATGTGACCCTTTACTTCAGCTCGGATCAGGGGAGTAATACATTTGATTATTCAGATCTTCGCTGGGGTGAACAGGCCCCAAAGACTCCCGAGATCTCATCCATGCTTTCTGCTGCTCTGGAAGGGGAATCTCCTTTTGAGCAAGATGCTAACCAACAGAAAAATCTGCAGTCTATCTCACAGGATGTGGTACCTGTGAAAGATGATTCTTCAAAGACACTGTCTGAGGAGCTTGTGGATATTGAATCCGATTTGAAATTCTTTCAGATGCCTTTTCTTGAAGGGAGCTGGGATGATACTTCATTGGAATCTTTGCTAGCTGGAGACACCACTCAGAATGGTGAAAACCTGATGAACCTGTGGAGCTTTGATGACATTCCTTCCATGTCTGGTGGTGTGTTCTGA | 1131 | 0.5022 | MCGGAIISDFIPAAAAVTARSRRLTAEYLWPDLKKGSSGKRVPKAAVIDLDDDFEADFREFKDDSDIDIDDDEDDAKPFAFAAAKAPKSISRGAGKSVAVKAQSEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPEEAPRTPPKRARPNLNAVQPNLSHKFSVGNNMENYGPLDGFEQKPLVNQTANMDSIPEGGNGFTSLTSPDDVTLYFSSDQGSNTFDYSDLRWGEQAPKTPEISSMLSAALEGESPFEQDANQQKNLQSISQDVVPVKDDSSKTLSEELVDIESDLKFFQMPFLEGSWDDTSLESLLAGDTTQNGENLMNLWSFDDIPSMSGGVF | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip06g01358 | 376 | Pfam | AP2 domain | 115 | 164 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | ProSiteProfiles | AP2/ERF domain profile. | 115 | 172 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | PANTHER | DNA-BINDING DOMAIN | 1 | 370 | IPR044808 | GO:0003700|GO:0009873 | |
Aip06g01358 | 376 | SMART | rav1_2 | 115 | 178 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | MobiDBLite | consensus disorder prediction | 95 | 119 | - | - | |
Aip06g01358 | 376 | CDD | AP2 | 115 | 173 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | PRINTS | Ethylene responsive element binding protein signature | 116 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | PRINTS | Ethylene responsive element binding protein signature | 138 | 154 | IPR001471 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | Gene3D | AP2/ERF domain | 114 | 173 | IPR036955 | GO:0003700|GO:0006355 | |
Aip06g01358 | 376 | PANTHER | EREBP TRANSCRIPTION FACTOR | 1 | 370 | - | - | |
Aip06g01358 | 376 | SUPERFAMILY | DNA-binding domain | 115 | 173 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip06g01358 | Aip-Chr6 | 21478870 | 21481661 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip06g01358 | 1 | 376 | AP2-EREBP Transcription Factor Family | AT1G53910 | 45.742 | 6.82e-71 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Aip06g01358 | AP2 | 4.5e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip06g01358 | K09286 | - | gmx:100170723 | 434.491 |