Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01356 atggcGGAGATCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCTGCCAGGCTAAGCCCTCAATCATTGCCGCCACCGGAACCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGATGACGCTTCCGCTAAGGACGACGACGTCTCCGTGGGGCCTGCCGTGGGGTCCTCAGTGGTCCCCGGAGCTCCCGCAAGGCTCTAG 336 0.628 MAEIGHKSDGQTIEWLLCQAKPSIIAATGTGTTPASFSSISVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDDVSVGPAVGSSVVPGAPARL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01356 111 MobiDBLite consensus disorder prediction 44 65 - -
Aip06g01356 111 ProSiteProfiles TCP domain profile. 1 27 IPR017887 -
Aip06g01356 111 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 107 IPR005333 GO:0003700
Aip06g01356 111 MobiDBLite consensus disorder prediction 81 111 - -
Aip06g01356 111 Pfam TCP family transcription factor 3 61 IPR017887 -
Aip06g01356 111 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 3 107 - -
Aip06g01356 111 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01356 Aip-Chr6 21424926 21425261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01356 3 96 TCP Transcription Factor Family AT5G23280 62.887 1.52e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip06g01356 TCP 5.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01356 K16221 - aip:107646651 168.703