Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01342 ATGGCGGCAGGAGAGGGTGGAAGAAGGGTGCTGCTACTGTTGTTATTGTTTACCAGTAACTGCATTCTTCATTGGATGCCCGTTGCTGTTAATGGTAACACAGATCCGAATGATGCGGCAGCTATAAGGATTTTATTTCAATCTATGAACTCACCTTCACAGCTATGTTGGCAAGCGAATGGTGATGATCCGTGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCATACCATACCAGCTTCCTCCAAATATGCAGCGCTTAAATCTGGCTTATAATAACTTCACTGGGACAATCCCTTACTCTATTTCTGATATGACCTCTCTTACAGACCTGAATCTTGGTCACAATCAGTTCCAGCAAGGATTGAACGTTAACTTCATGAAGCTTTCTACCCTCTCTTCATTGGATCTCTCCTTCAATTTATTGACAAGTGACCTTCCGCAGACTTTGAGCTCACTTTCAGGCATTACCAGCATGTATCTGCAGAACAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCTCTTGAAAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCAGAACAATTAAAAAGCATAAATTTAAAGACTGGTGGTAATACATGGAGCTCCGGACCTGCACCCCCACCTCCTCCCGGGACCCCACCATTACCTAAAAGCAATCGACACCACAGAGCCGGTGGCGGAAGCACCACTACCTCCCCCTCAGATGCTGGCAGCAGTAACAACATGAGTGACGGCAGCAAAAAATCTGGTGTTGGAGGTGGTGGCATAGCTGGAATTGTGATCTCGATAATTGTTGTTGGGGCAATAGTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAACAGGACAATCAGTCCTTTGCTCCTCTTCCCTCAAATGAATTCCATGAATTGAAATCTGTGCCACCTTCCTCTATAACTGAAATGAAGACATTTGAAACTTCTGCCTCAATAAATCTTAAACCCCCACCTATGGATCGTCATAAATCATTTGATGAGGATGAACTTTCAAAGAAGCCTGCCATTATCAAGAAGACTGTCACATCTCCTGCTAATGTGAAATCATACTCTATAGCTGATCTACAGATTTCAACCGGAAGCTTCAGTATTGATCATCTTGTTGGTGAGGGGTCCTTTGGTCGTGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGACCTTTCTGAAGAATTTACAGAAATAGTTTCAAACATCTCTCATTTACATCATCCGAACGTGACAGAACTAGTAGGTTATTGTTCAGAGTATGGGCAGCACCTCTTAGTCTATGAGTTTCATAGAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAGCCATTGATATGGAATTCCCGTGTGAAGATTGCATTGGGGACTGCGCGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTACACAAGAACATTAAATCAGCCAACATATTACTTGATGCAGAACTTAATCCTCATCTTTCAGACAGTGGATTAGCAAGCTATATTCCAAATGCAGACCAGGTGTTGAACCAAAATGCCGGATCTGGATATGATGCACCTGAAGTTGCTTTGTGTGGTCAGTATACCATGAAAAGTGATGTTTATTGCTTTGGAGTTGTGATGTTGGAGCTACTCAGCGGACGTAAACCATTTGATAGCTCGAGACCTAGAGCTGAGCAGTCTCTAGTTCATTGGGCCGCACCTCAACTCCATGATATTGATGCATTGACCAAAATGGTTGATCCTGCGCTGAAAGGGTTATATCCTGTTAAATCTTTGTCTCGTTTTGCAGATGTTATTGCTCTCTGCGTTCAGCTGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCCTTAGTACGGTTGGTGCAGCGAGCCAACATGAGCAGGCGGACTACTTTTGGATCTGATCATGGAGGATCCAATCGAGGGAGTGATGAACCCGCCATACATGATAATGTATAA 2166 0.4266 MAAGEGGRRVLLLLLLFTSNCILHWMPVAVNGNTDPNDAAAIRILFQSMNSPSQLCWQANGDDPCGQYWKGITCSNNRVTEIKLSNLKLTGTLPYGLQPLTSLTNLDLSSNNLGGGIPYQLPPNMQRLNLAYNNFTGTIPYSISDMTSLTDLNLGHNQFQQGLNVNFMKLSTLSSLDLSFNLLTSDLPQTLSSLSGITSMYLQNNQFTGTIDVLANLPLENLNVENNNFTGWIPEQLKSINLKTGGNTWSSGPAPPPPPGTPPLPKSNRHHRAGGGSTTTSPSDAGSSNNMSDGSKKSGVGGGGIAGIVISIIVVGAIVAFFLVKRKSKKSSSDLEKQDNQSFAPLPSNEFHELKSVPPSSITEMKTFETSASINLKPPPMDRHKSFDEDELSKKPAIIKKTVTSPANVKSYSIADLQISTGSFSIDHLVGEGSFGRVLAVKKIDSSVLPNDLSEEFTEIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHRNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNQNAGSGYDAPEVALCGQYTMKSDVYCFGVVMLELLSGRKPFDSSRPRAEQSLVHWAAPQLHDIDALTKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSNRGSDEPAIHDNV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01342 721 Pfam Protein tyrosine and serine/threonine kinase 439 686 IPR001245 GO:0004672|GO:0006468
Aip06g01342 721 MobiDBLite consensus disorder prediction 698 721 - -
Aip06g01342 721 PANTHER OS01G0253100 PROTEIN 24 715 IPR045271 GO:0004714|GO:0006468
Aip06g01342 721 MobiDBLite consensus disorder prediction 243 299 - -
Aip06g01342 721 MobiDBLite consensus disorder prediction 370 389 - -
Aip06g01342 721 SUPERFAMILY L domain-like 34 238 - -
Aip06g01342 721 MobiDBLite consensus disorder prediction 272 296 - -
Aip06g01342 721 SUPERFAMILY Protein kinase-like (PK-like) 405 686 IPR011009 -
Aip06g01342 721 Gene3D Phosphorylase Kinase; domain 1 386 491 - -
Aip06g01342 721 Gene3D Transferase(Phosphotransferase) domain 1 493 705 - -
Aip06g01342 721 ProSiteProfiles Protein kinase domain profile. 424 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01342 721 MobiDBLite consensus disorder prediction 251 265 - -
Aip06g01342 721 MobiDBLite consensus disorder prediction 330 356 - -
Aip06g01342 721 Gene3D Ribonuclease Inhibitor 35 256 IPR032675 -
Aip06g01342 721 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 24 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01342 Aip-Chr6 21010695 21016575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01342 8 699 Strubbelig Receptor Gene Family AT1G53730 64.316 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip06g01342 PK_Tyr_Ser-Thr 3.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01342 - - aip:107646143 1338.55