Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01341 ATGGCTGAGGAACTGGATAAGCCTCTGCTCGATCCCGAGAATTTCAACCGAGATGGTATTGATTTGGAGCGCATACCATTGGAAGAAGTATTTCAACAGTTGCGAACATCGCGAACTGGGCTTTCATCTGACGACGCTGAAGCCCGGCTGCAGATATTTGGCCCCAACAAACTTGAAGAGAGGAAAGAGAATAAAATACTGAAATTTCTAAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCAGCATTGATGGCAATTATCCTTGCTAATGGGGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTTTATGCCTTCTGGTAATAAACTCAACAATAAGTTTCATAGAAGAAAATAATGCTGGTAATGCTGCAGCAGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTAAGAGATGGGCTATGGCAAGAGCAAGATGCAGCTATATTAGTACCTGGAGACATAATCAGCATAAAGCTAGGAGATATCATTCCAGCCGATGCTCGATTGCTTGAAGGGGACCCTCTAAAAATTGACCAGGCAAAATCAAGATGCTTTCTTATGCAGTCGGCGCTTACCGGAGAATCTTTACCTGTCACAAAGAGAACGGGCAATGAGGTATTTTCGGGTTCAACATGTAAGCAGGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCATTCCTTTTTCGGAAAGGCAGCACATTTGGTAGATAGCACAGAAGTTGTTGGGCACTTTCAGAAGGTCCTTACTTCAATTGGTAACTTCTGCATTTGCTCTATAGCTATAGGGATGCTACTTGAAATAATCATAATGTTCCCAGTGGAGCATCGTTCATACAGGGATGGAATTAACAACCTTCTTGTTCTCTTGATTGGAGGAATACCCATTGCCATGCCTACAGTACTGTCTGTGACACTTGCAATCGGCTCTCATCGTCTTTCTCAGCAGGGAGCCATCACAAAGAGAATGACAGCCATTGAAGAAATGGCTGGGATGGATGTCCTATGCAGTGATAAAACTGGAACTCTTACACTAAACCGGCTAACCGTTGATCGAAACCTTGTAGAGGTCTTTAACAGAAACATGGACAGAGATATGGTTATTCTATTAGCAGCCAGAGCATCCAGACTGGAAAACCAAGATGCCATTGACAGTGCCATTGTTAACATGCTAGCTGATCCAAAGGAGGCACGTGCAAACATTACTGAGCTTCATTTTCTACCTTTCAATCCAGTAGATAAACGCACAGCAATCACATATATTGATACAGATGGTAACTTTTACAGGGCCAGCAAAGGAGCACCCGAACAGATTCTAAATATGTGCCAAGAGAAAGACGAGATTGCTAGAAAAGTGCATGCAATCATTGACAAATTTGCTGAGAGGGGACTGCGATCTCTTGCAGTGGCTTATCAGGAAATTCCTGAAAAATTCACGGATGGTCCTGGAGGTCCATGGACATTTTGTGGTTTGTTGCCTCTTTTTGATCCTCCAAGGCATGATAGTGCTGAGACCATCAGGAGAGCACTTAACCTGGGAGTCTGTGTTAAGATGATCACAGGGGATCAGTTGGCAATTGCAAAGGAGACTGGCAGAAGACTTGGTATGGGGACAAACATGTATCCTTCTTCATCTTTATTGGGACGTGAAAAAGATGAAAATGAAGCACTCCCAGTCGACGAGCTCATCGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACATAAATATGAAATAGTGAAAATTTTGCAAGAAAAGAAGCATGTAGTTGGAATGACAGGAGATGGAGTGAATGATGCCCCAGCACTGAAGAAAGCAGATATTGGAATAGCTGTGTCAGATGCTACAGATGCTGCAAGAGGTGCCGCTGATCTGGTCTTAACTGAGCCTGGCTTAAGTGTCATCATCAGCGCCGTCTTAACTAGCCGAGCTATATTTCAGAGAATGAAAAATTATACAATATATGCTGTTTCCATCACAATAAGGATAGTGCTTGGTTTTGTGCTCCTAGCTTTGATTTGGGAGTTTGATTTCCCACCTTTCATGGTCCTTATTATTGCAATACTGAATGATGGTACGATCATGACCATATCGAAAGACCGAGTGAAGCCATCCCCTACACCTGATAGTTGGAAGCTGCCAGAGATATTTGCCACAGGAATTGTCATTGGCACGTACCTTGCTTTGGTTACTGTCCTATTCTACTGGGCAGTAGTTGACACCACTTTCTTTGAGACTCACTTCCATGTAGCATCCTTATCCAGCGACAGTGAGAAAGTTGCATCCGCTGTATATCTGCAAGTTAGCATCATCAGCCAAGCTTTAATTTTTGTGACTCGCAGCCGCGGCTGGTCATTCCTAGAGAGACCAGGAGTTCTACTAATGTGTGCCTTTGTAATAGCTCAATTGGTAGCCACCTTGATTGCTGTCTATGCACACATCAGTTTTGCTTATATAAGAGGAATTGGATGGCGGTGGGCTGGTGTTATATGGTTATATAGTTTAGTGTTTTATGTGCCTTTGGACATCATTAAGTTCATAGTGCGCTATGCTTTGAGTGGAGAAGCCTGGAATCTGGTATTTGACAAGAAGACTGCTTTTACATCAAAGAAAGACTATGGAAAGGAAGACAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTCTGCAAGGACTCATGGCTGTGGACCTCGGGGCCAACGAGAGGAGCTCTTCTTGGATAGCTGAACAAGCCAGGCGCCGCGCCGAAATAGCCAGGCTGGGGGAATTGCACACTTTGAGAGGACATGTAGAGTCTGTTGTGAGACTCAAAAAGTTAGATTTGAAAATGATCCAATCAGCACACACAGTCTAA 2880 0.4375 MAEELDKPLLDPENFNRDGIDLERIPLEEVFQQLRTSRTGLSSDDAEARLQIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFVGILCLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGLWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQAKSRCFLMQSALTGESLPVTKRTGNEVFSGSTCKQGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAIGMLLEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLVEVFNRNMDRDMVILLAARASRLENQDAIDSAIVNMLADPKEARANITELHFLPFNPVDKRTAITYIDTDGNFYRASKGAPEQILNMCQEKDEIARKVHAIIDKFAERGLRSLAVAYQEIPEKFTDGPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAVVDTTFFETHFHVASLSSDSEKVASAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATLIAVYAHISFAYIRGIGWRWAGVIWLYSLVFYVPLDIIKFIVRYALSGEAWNLVFDKKTAFTSKKDYGKEDRAAKWVLSQRSLQGLMAVDLGANERSSSWIAEQARRRAEIARLGELHTLRGHVESVVRLKKLDLKMIQSAHTV 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01341 959 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Aip06g01341 959 Pfam E1-E2 ATPase 136 323 - -
Aip06g01341 959 SUPERFAMILY HAD-like 340 649 IPR036412 -
Aip06g01341 959 SUPERFAMILY Calcium ATPase, transduction domain A 138 244 IPR008250 -
Aip06g01341 959 Gene3D - 138 231 - -
Aip06g01341 959 SFLD p-type atpase 326 653 IPR044492 -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 344 358 - -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 520 530 - -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 194 208 - -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 625 637 - -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 498 509 - -
Aip06g01341 959 PRINTS P-type cation-transporting ATPase superfamily signature 602 621 - -
Aip06g01341 959 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 820 IPR006534 GO:0008553|GO:0016021|GO:0120029
Aip06g01341 959 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 861 IPR023298 -
Aip06g01341 959 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 939 - -
Aip06g01341 959 CDD P-type_ATPase_H 40 855 IPR006534 GO:0008553|GO:0016021|GO:0120029
Aip06g01341 959 Gene3D - 100 829 - -
Aip06g01341 959 PRINTS H+-transporting ATPase (proton pump) signature 633 658 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 PRINTS H+-transporting ATPase (proton pump) signature 460 478 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 PRINTS H+-transporting ATPase (proton pump) signature 602 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 PRINTS H+-transporting ATPase (proton pump) signature 774 795 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 PRINTS H+-transporting ATPase (proton pump) signature 574 590 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 577 689 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 362 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip06g01341 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 346 352 IPR018303 -
Aip06g01341 959 Gene3D - 911 959 - -
Aip06g01341 959 PANTHER CALCIUM-TRANSPORTING ATPASE 1 939 - -
Aip06g01341 959 Gene3D - 341 639 IPR023214 -
Aip06g01341 959 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Aip06g01341 959 Gene3D - 356 503 IPR023299 GO:0000166
Aip06g01341 959 SFLD Haloacid Dehalogenase 326 653 - -
Aip06g01341 959 Pfam haloacid dehalogenase-like hydrolase 340 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01341 Aip-Chr6 20940955 20948226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01341 1 959 Primary Pumps ATPases AT1G17260 80.188 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01341 K01535 - zju:107434382 1667.51