Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01331 ATGAGATCGAGGCATGGGCGCATGGGTGTAGTAAAGATCTTCAAAACGTTAAATTCAGCTGTTGGCATCTCTAGTCCAAACACAAAAGCTTCATTCCTAAGTGGGAGGAAGTTGAAGAGGGCGGCTAAGCAGGCAGCAGGCGTTAGAGGAGTATCGAGCACAAGAGTATGTGCAGCAGCGGCTGACCCTGAGAGACCCCTGTGGTTCCCGGGAAGCACGCCTCCTCCATGGCTTGATGGCACCCTTCCTGGAGACTTTGGGTTTGATCCACTTGGTCTGGGGTCTGATCCTGAGAGCCTGAGATGGAATGTGCAGGCAGAGCTGGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTCCTGAATTCCTAACAAAGATTGGCGTGCTCAACACGCCATCGTGGTACACAGCTGGAGAACAGGAGTACTTCACGGACACAACCACGCTCTTCATAGTTGAGCTCATCTTCATTGGATGGGCAGAGGGAAGGAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAATACCGACCCCATTTTCCCAAACAACAAGCTCACTGGCACCGATGTTGGTTACCCCGGTGGCCTCTGGTTTGACCCTCTCGGATGGGGCACTGGCTCTCCTGAAAAGATCAAGGAATTGAGAACTAAGGAGATCAAGAATGGCAGGCTCGCCATGTTGGCTGTCATGGGTGCTTGGTTCCAGCACATCTACACCGGCACTGGTCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 813 0.5351 MRSRHGRMGVVKIFKTLNSAVGISSPNTKASFLSGRKLKRAAKQAAGVRGVSSTRVCAAAADPERPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01331 270 SUPERFAMILY Chlorophyll a-b binding protein 58 268 - -
Aip06g01331 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Aip06g01331 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 23 270 - -
Aip06g01331 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Aip06g01331 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 270 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01331 Aip-Chr6 20808348 20810395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01331 56 270 Chloroplast and Mitochondria Gene Families AT3G61470 91.163 4.12e-149 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01331 K08908 - tcc:18609005 471.47