Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01320 ATGGAAACTCCATTGGAATCAAGTGCAAACAATCATCTTAAACCCAAAGAAGAAGAGAAGGAAGAAGAAGACAGCTTGAGTCTTGCCATGGAAATGCTGGGTCTGAATGTGGTTCCACTGGCGGTGAATTCAGCTGTTGAGCTTGGTGTGTTTGACACCATAGCCAAAGCTGGTGAAGGCGCCATGCTCTCTGAAAAGGAAATTGCCTCTCAGATTGGGAGCAAAAACCCAGAAACACCTCAAATGCTGGATCGCCTTCTTAGGTTGTTGGCAAGTCACTCTCTCCTTCGTTGCTCTGTTTCCCAACAAGATCATAGTCACAGACTCTACAGCCTCTCCCCTCGCTCCAAGTATTTTGTCACCGATGCGGACGACGGCAGCTCGTTGGGACCAACCTTGGCTTTGCTTCTCGACAATGTCTTCTACCAAAGCTGGAAGGGAGTGAAAGGAGCAATTATGGAAGGCTTTGAGGACATCAAAACTCTGGTGGACGTTGGTGGTGGTTTTGGGGTGAATCTTCATTTGATCACTTCCAAATATCCGAATGTAAAGGCTATTATTAATTTTGACTTGCCTCATGTCATACAACATGCTCCTCTCTATGCTGGCGTGGAGCACGTGGCAGGAGATATGTTTGACAGTGTTCCTAAAGGAGATGCCATTTTTTTGAAGCTGTTAAGGAATTGTCACAAGGCTATTCCAGATGATGGAAAGGTGATTGTGGTGGAGAGAATTCTGCCGGTGGTTTCTGATACAACACGTGATGCCAAGTCTAGTTTCCAATCTGATATCTTAATGATGATTCAGAACCCACCAGGAATTCATTGTATTGGCCACAGCATCTGGATTTAG 852 0.4542 METPLESSANNHLKPKEEEKEEEDSLSLAMEMLGLNVVPLAVNSAVELGVFDTIAKAGEGAMLSEKEIASQIGSKNPETPQMLDRLLRLLASHSLLRCSVSQQDHSHRLYSLSPRSKYFVTDADDGSSLGPTLALLLDNVFYQSWKGVKGAIMEGFEDIKTLVDVGGGFGVNLHLITSKYPNVKAIINFDLPHVIQHAPLYAGVEHVAGDMFDSVPKGDAIFLKLLRNCHKAIPDDGKVIVVERILPVVSDTTRDAKSSFQSDILMMIQNPPGIHCIGHSIWI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01320 283 SUPERFAMILY "Winged helix" DNA-binding domain 20 122 IPR036390 -
Aip06g01320 283 MobiDBLite consensus disorder prediction 1 25 - -
Aip06g01320 283 MobiDBLite consensus disorder prediction 11 25 - -
Aip06g01320 283 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 273 IPR029063 -
Aip06g01320 283 Pfam Dimerisation domain 42 91 IPR012967 GO:0046983
Aip06g01320 283 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 153 274 - -
Aip06g01320 283 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 155 - -
Aip06g01320 283 Gene3D Vaccinia Virus protein VP39 152 270 IPR029063 -
Aip06g01320 283 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 283 IPR016461 GO:0008168
Aip06g01320 283 Gene3D - 6 119 IPR036388 -
Aip06g01320 283 PANTHER O-METHYLTRANSFERASE 153 274 IPR016461 GO:0008168
Aip06g01320 283 PANTHER O-METHYLTRANSFERASE 1 155 IPR016461 GO:0008168
Aip06g01320 283 Pfam O-methyltransferase domain 156 269 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01320 Aip-Chr6 20430992 20432409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01320 7 273 Monolignol Biosynthesis Gene Families AT5G54160 38.298 1.48e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01320 K13066 - gmx:100789402 281.952