Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01317 ATGGAAGCACAAAGCCCTCGCCATTCACAAGTCATTGAAATCAGTGGAGATCTTCCTGACTTAGGAAGGAGGAACGGAGGAGTAAGTAGAAAAATTTGTGGGGAAGCAGCATGTGGGTTCTCTAAGGATTCCGAAGAGAGATCAGCTTCGATGCGAAAGCTTTTAATAGCAGTGGTGCTTTGTGTTATTTTCATGAGCGTTGAAGTAGTTGGAGGGATCAAAGCAAATAGTCTGGCAATATTAACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCATTCGCAATCTCTTTGTTTTCTTTATGGGCTGCTGGATGGGAATCCAATCCTCGCCAATCATACGGGTTTTTCAGGATAGAGATTCTCGGTGCTCTGCTTTCTATCCAGTTGATATGGTTGCTTGCTGGGATTCTAGTGTATGAAGCCATTCAGAGAATTATTTCAGGGACTCGTGAGGTCAATGGCTTCTTAATGTTCCTTGTTGCTGCATTTGGTTTAGTTGTTAACATCATTATGGCTTTCTTATTGGGTCATGATCACGGCCATAGCCACAACCATGCACATGGTAGTGATCATGATCATCATGGCACAAAACACACAAAAAAGGATTCTACACCGCTTCTTGGGGAATCCAAAAATGTGAATGTGCAGGGGGCTTATCTGCATGTACTTGGAGATTCTATCCAGAGTGTGGGGGTAATGATTGGTGGAGCAATCATATGGTGGAAGCCGGAGTGGCAAATAGTTGACTTAATTTGCACTCTAGTATTTTCGGTAATTGTTTTGGGGACAACTATAAACATGCTGAGGAACATTCTGGAAGTTCTGATGGAGAGCACGCCGCGTGAAATAGACGCGGCGGAGGTCCAAAGGGGGCTGCTGGAGATGGAAGAAGTGTTGGCTGTTCATGAGTTGCATATTTGGGCCATCACTGTTGGGAAGGTTTTGCTGGCTTGCCATGTTATAGTTAGGCCAGAAGTGAATGCAGACATAGTGCTGGACAAGGTTATTGACTATATCACAAGAGTTTATAATATTAGTCATGTCACTATACAGATAGAGCGCTAG 1068 0.4373 MEAQSPRHSQVIEISGDLPDLGRRNGGVSRKICGEAACGFSKDSEERSASMRKLLIAVVLCVIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWESNPRQSYGFFRIEILGALLSIQLIWLLAGILVYEAIQRIISGTREVNGFLMFLVAAFGLVVNIIMAFLLGHDHGHSHNHAHGSDHDHHGTKHTKKDSTPLLGESKNVNVQGAYLHVLGDSIQSVGVMIGGAIIWWKPEWQIVDLICTLVFSVIVLGTTINMLRNILEVLMESTPREIDAAEVQRGLLEMEEVLAVHELHIWAITVGKVLLACHVIVRPEVNADIVLDKVIDYITRVYNISHVTIQIER 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01317 355 Gene3D Cation efflux protein transmembrane domain 50 276 IPR027469 -
Aip06g01317 355 PANTHER METAL TOLERANCE PROTEIN A1 1 201 - -
Aip06g01317 355 PANTHER METAL TOLERANCE PROTEIN A1 210 355 - -
Aip06g01317 355 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 210 355 - -
Aip06g01317 355 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 201 - -
Aip06g01317 355 TIGRFAM CDF: cation diffusion facilitator family transporter 51 355 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aip06g01317 355 MobiDBLite consensus disorder prediction 185 204 - -
Aip06g01317 355 SUPERFAMILY Cation efflux protein transmembrane domain-like 48 278 IPR027469 -
Aip06g01317 355 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 283 354 IPR036837 -
Aip06g01317 355 Pfam Cation efflux family 54 277 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01317 Aip-Chr6 20333445 20334512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01317 1 355 Inorganic Solute Cotransporters AT2G46800 67.830 1.20e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01317 K14689 - gmx:100794876 511.916