Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01315 ATGCAAATGCAGGAGGAGCAGATCAAGAAGCTGAAGGACGAGAATGCGCCACCGGGGGACGTGGTGGTTAGGTGGGAGAGGTTTCTCCCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACTCGCCAGATCATATCCGCCCTTCTCCGAAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAGCAAAGCACCTGAGATTGATCTTATATTAACAGAAGTGGAGTTGCCGTCAATATCTGGATTTTCACTTCTCACGTTGATAATGGAGCATGACATCTGCAAAACCATTCCTGTCATAATGATGTCTACTAATGATTCAATTAGCATGGTATTCAAATGCATGCTGAAAGGTGCGGCTGATTTTCTTATAAAACCCATTCGAAGGAATGAGCTACGGAACTTATGGCAGCACGTATGGAGAAGGCATGCTATTAGCCGGTCCCATCAGAGTTTAACATTGCCGCAGAATAAATTTGAAGTTGCTGCAGAAAACAATGCTACGAGCAATAATTCTAGTGGTTCTGTGGCTTCCCCACAGAAAAATAAAGAGTACAGTGGTGAGAAAGCAAGTGATGCTCAAGTTACGTCCCCGTTGAAAAGTTCCTCGAAGTTGATTGATATTGACACAGTGAAGCATGAAGAGGCTACCAAATTTGAAAGGGAATCAGCTACGCACTATAGTGAATCCGGTGAGAAATCAAATATGTTTGTATCCGATGCTACAAGGTGCTACAAAACTCTTAATGCGACAGGTGTAAGGCTAGATCAAGGCTTTGATTGTGATGAAACAGAAAATGAAGATGAAGTTTTAAGAACAGAATTAAGCAAAGCCCATCCTCATATTAATACCGAGATCAACAAATGCAATGATACACTGGTAGAACCTTCTACAGGGGCAATTGACTTGATTGCTACATTTGAGAATTCTCCAAAGAGCACGGGTGAAATTTGTAGTTTCAATGCTGACAACGCATTCAAGTCAGTTTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTCTCCTAGTAGCTCATGTAAGCCTGCACTGGAAGAAAGGAAAATATTGAACCATTCAACTGCATCGGCCTTTTCTTGGTATAGCAGCAGTAAGTTGTTGCAGCCCCTTTTCCCATCTCAATCAATTACTTCTGCTAAACTATCAAGTGTCAGTTGTAATTCTCATGAATCCCATAAGTCATCTGAAAATACACATACTCATCATCAGCACGGTGATAAAATTCAAGATAAACAGAACATGACCACTTTGGTCACTCAGACTGGCCAAATTGAACCAAAATCACCAAACAATGAACTTGGATTCTCTTGTGCTACTGGTGTTTCTTCTGATCATAACTCTATGAGGCATGCCAATGCTTTCCCTCGTATGCCCTGTGCACAATCAGCTGTGCATCCCATATGGACTCCGAAACCAGTGTCCAAGAAAGAAAATTCTCCATTTCCCACTAGTGCTGCTTCTCATTCCAACCCTGAAACTGACAATTCAGAATGTCATCAATGCTCGGATGATGCCACCTACACTTCTGATCAAAATGGAAATGATCAAAGCAAGTTGGATTGTGTTAGGCATGACTCTGTTGCTGCTGGTGGTCAGAGTGCAAGTACTAGTTTTTACCTTGAAAATCATAATAGCAGCGGTGCATATGGAAGCATAGGCAGCGGAAGTGATGCAAATGCTACTTCAGCTGTTGTAACTAAGAACAACCCTGAAAGTTTTGCTGATAGTAGTCAACATAGTCATGATGGATTCAGAGGGACAGATTCTCATCGGAGCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTGAAGAGGAAGGAGAGATGCTACGAGAAGAAGGTACTGCAACCATGCTGTTCGATATCAGAGCCGGAAAAGACTGGCAGAGCAGCGCCCTAG 1962 0.4271 MQMQEEQIKKLKDENAPPGDVVVRWERFLPRMALRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWETLKSKAPEIDLILTEVELPSISGFSLLTLIMEHDICKTIPVIMMSTNDSISMVFKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISRSHQSLTLPQNKFEVAAENNATSNNSSGSVASPQKNKEYSGEKASDAQVTSPLKSSSKLIDIDTVKHEEATKFERESATHYSESGEKSNMFVSDATRCYKTLNATGVRLDQGFDCDETENEDEVLRTELSKAHPHINTEINKCNDTLVEPSTGAIDLIATFENSPKSTGEICSFNADNAFKSVFDTQLGLSLRRDSPSSSCKPALEERKILNHSTASAFSWYSSSKLLQPLFPSQSITSAKLSSVSCNSHESHKSSENTHTHHQHGDKIQDKQNMTTLVTQTGQIEPKSPNNELGFSCATGVSSDHNSMRHANAFPRMPCAQSAVHPIWTPKPVSKKENSPFPTSAASHSNPETDNSECHQCSDDATYTSDQNGNDQSKLDCVRHDSVAAGGQSASTSFYLENHNSSGAYGSIGSGSDANATSAVVTKNNPESFADSSQHSHDGFRGTDSHRSSQREAALTKFRLKRKERCYEKKVLQPCCSISEPEKTGRAAP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01315 653 MobiDBLite consensus disorder prediction 496 518 - -
Aip06g01315 653 PANTHER TWO-COMPONENT RESPONSE REGULATOR 211 643 IPR045279 GO:0009736
Aip06g01315 653 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 213 IPR045279 GO:0009736
Aip06g01315 653 MobiDBLite consensus disorder prediction 490 518 - -
Aip06g01315 653 SUPERFAMILY CheY-like 34 165 IPR011006 -
Aip06g01315 653 MobiDBLite consensus disorder prediction 412 429 - -
Aip06g01315 653 CDD psREC_PRR 36 139 - -
Aip06g01315 653 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Aip06g01315 653 PANTHER PRR RESPONSE REGULATOR 211 643 - -
Aip06g01315 653 PANTHER PRR RESPONSE REGULATOR 26 213 - -
Aip06g01315 653 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
Aip06g01315 653 MobiDBLite consensus disorder prediction 590 619 - -
Aip06g01315 653 MobiDBLite consensus disorder prediction 407 432 - -
Aip06g01315 653 MobiDBLite consensus disorder prediction 601 619 - -
Aip06g01315 653 MobiDBLite consensus disorder prediction 179 211 - -
Aip06g01315 653 Gene3D - 32 263 - -
Aip06g01315 653 SMART REC_2 34 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01315 Aip-Chr6 20320499 20325237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01315 610 635 Response Regulator Gene Family AT5G24470 80.769 3.11e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g01315 Response_reg 1.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01315 K12130 - gmx:100779346 760.755