Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip06g01311 | ATGTCGATTGCAGAGGCTGCTTGCAGTTACGCCGTTATGATCCTTCACGACGACAAACTCCCTGTCACTGCTGAAAATATCTCGTCCTTGTTGAAAAGTGCCAAGGTGTCAGTTGAGTCATACTGGCCCAGCTTATTCGCTAAACTCGCTGAGAAAAGAAATGTTGAGGATTTGATAGCCAGCGGTGGAGGAGGTGGGGCTCCAGTTGCTGTTGCTGCCGCCCCTGTTGCCGCAGCCGGTGGTGGTGGTGGTGCAGCAGCAGCTCCTGCAGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGTGATGATGATATGGGATTCAGCTTATTTGACTAG | 342 | 0.5146 | MSIAEAACSYAVMILHDDKLPVTAENISSLLKSAKVSVESYWPSLFAKLAEKRNVEDLIASGGGGGAPVAVAAAPVAAAGGGGGAAAAPAAEEKKKEEPQEESDDDMGFSLFD | 113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip06g01311 | 113 | Hamap | 50S ribosomal protein L12 [rpl12]. | 6 | 113 | IPR027534 | GO:0003735|GO:0005840|GO:0006414 | |
Aip06g01311 | 113 | Pfam | 60s Acidic ribosomal protein | 22 | 112 | - | - | |
Aip06g01311 | 113 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN | 1 | 106 | - | - | |
Aip06g01311 | 113 | MobiDBLite | consensus disorder prediction | 79 | 113 | - | - | |
Aip06g01311 | 113 | Gene3D | - | 1 | 63 | IPR038716 | - | |
Aip06g01311 | 113 | CDD | Ribosomal_P1 | 5 | 112 | - | - | |
Aip06g01311 | 113 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P1 | 1 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip06g01311 | Aip-Chr6 | 20268953 | 20270242 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip06g01311 | 1 | 113 | Cytoplasmic Ribosomal Protein Gene Family | AT5G24510 | 51.724 | 4.69e-36 | 117 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip06g01311 | K02942 | - | ncol:116248277 | 123.635 |