Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01308 ATGAGCAGCAAAACTGGTGTATTCCTCGTACTTGTCACAATCCTATTGGGACTCTCCTCCTTCACTCTCTACCTCATAGCAGAAGCCACACGTTCTCAGGATCATGGGATTGGATTCATCACTCATTTATGGTGGACTTTAGTACCTTGCGGCCAGTTCTACTACTACTACTTTCTGCACTGTCAAAAAATATTAAAGAATAAAATTGAGGTTTGTGCTATGAAGTTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGATCGATCAAAGCTTTCAAAATTCGATTGGAAATATATCATAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCAGTCCTGGCCCGTGATCTTGATAGGAAAACTCCCAATCTACAAGCAGTCGATAGAAACACATCACATCACACACAACCCAAACTTTCTCAGAGACACAATGAGCCAAAAAGTGGAAATCACCAACTCTATATGGGGGTGGGGGAAATTACCTCTGCATCAGCATATGCTGATTGCCTCCTGATGCTGAATCGAGGATACTTGATAACCGATTTTGAATGGTACCATCTCAGCTTTAACTATTTCCAAGATTGA 594 0.404 MSSKTGVFLVLVTILLGLSSFTLYLIAEATRSQDHGIGFITHLWWTLVPCGQFYYYYFLHCQKILKNKIEVCAMKFNVLVTTYEFIMYDRSKLSKFDWKYIIIDEAQRMKDRDSVLARDLDRKTPNLQAVDRNTSHHTQPKLSQRHNEPKSGNHQLYMGVGEITSASAYADCLLMLNRGYLITDFEWYHLSFNYFQD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01308 197 Gene3D - 54 132 IPR038718 -
Aip06g01308 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 125 IPR027417 -
Aip06g01308 197 Pfam SNF2-related domain 71 118 IPR000330 GO:0005524|GO:0140658
Aip06g01308 197 MobiDBLite consensus disorder prediction 128 153 - -
Aip06g01308 197 PANTHER SNF2/RAD54 HELICASE FAMILY 70 122 - -
Aip06g01308 197 PANTHER ATP-DEPENDENT HELICASE BRM 70 122 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01308 Aip-Chr6 20227516 20230159 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip06g01308 SNF2_N 4.9e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01308 - K11647 aip:107646122 261.922