Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01291 ATGGAGGACATGATAATCTCTCCCTCCTCATCATCTTCTCTGGTGTCTATCCCACAAGAAAACACACCAACCCTTCAGCAAAAGCTTCACTTCCTACTCCAAAACCAGTTACCAGAATGGTGGGTCTATGGCATCTTCTGGCACACAACCAACGACGACAATGGCAATCTCTTCCTCTCCTGGGGAGACGGCCATTTCCAAGGCGCCAAAGACGCCTCCTCCCCGAGACTTATTCCTCATTACCCCATTTCAGCGACGGACAGATGCAGAAAGTTCAACAACAGCAACAATAACAATGACGGAGAATGGTTCTACGTGATGTCTTTGACACGCACCTTTCCTATGGGCGAAGCTTCATATTCTTCGCTACCCGGGAAGGCCTTTGGTTCGGGGTCTCCCATCTGGCTCAACGGGGACCTTCAATTCTGCGACTGTGACAGAGCTAAAGAAGCTTACATGCATGGCATTCGAACTCTCGTACACATTCCAACCACAGATGGCGTTCTTGAAATGGGTTCCTACGATCTCATCACTGAAAACTGGACTCTCCTTCAACAAACCAAGTCCCTCTTTGGATCGCAACACCAGCAACTCAATCCTATACAGTTCTTCGACGACCAGAACATCTCCTTCGCTGACATTGGCATTATCGCCGGCGTTCAAGAAGAAGAAAACTCACACGAAGAAGATGCCGTCAGAAAGAGAAAGGAAACGGAGGCACTCAACAACAAGAAAAAGAATAAGGATCACTCGTCAATGGGGAAGTTTGGATCATCGCGTCAATCGTCCTTCGTGGATTCGGAGCATTCAGACTCGGACTGTGGTGCACCAATGGCGGCAGCAGAGAAGAGGTTGCCGAAGAAGAGAGGGAGGAAACCAGGGATAGGGCGTGAAACCCCGCTGAACCACGTGGAGGCAGAGCGGCAGCGGAGGGAGAAGCTCAACCACCGGTTCTATGCTCTGAGGGCGGTGGTTCCAAACGTGTCAAGGATGGACAAGGCTTCTTTGCTTTCCGACGCGGTGTCTTACATCAACGAGCTGAAGGCAAAGATCGAAGAGTTAGAGACTCAGGTTCAGAAGGAGTCATCGATCAACAACAATAATAAGAAGGTGAAGGTTGAAACTGGCGACAGCATGGACAACCAGAGCACCACCACAACCTCCTCCGTGGACCAAAACAATAACGAGAATGAGGCGGCAGAGGTGCAGGTCGAGGTGGAGGTGGAGGTGAAGATGATAGGAGAAGAGGCGGCGATGGTGAGGGTTCAGTCGGAGAGTGGGACCCACCCTGGTGCGAAACTGTTGAATGCATTGCGGGAATTGGAGTTTCAAGTGCAGCATGGAAGCATTTGGTGCGTCAACGAGAGCAGCATCATGCTCCAACACGTTCTTGTGAAGCTTCCAGAAGGGATCACGATGAGAACTGAACAAGCGCTTAAATCTGCCATTCTAAGCAGATTATTGGATCATCATAATCAGTGGGATGAGTTTGTGCCAAGGAACGATGCAGGGGCACAGAGATTACTTTCCGCACGCCTTGCACTGGATCGGCTGCGTGCCCACGATgcacctcctagagtgcacgtttatgacagaccagataacagacgagtcgatcggtgccgccgtatagggacccggaccaccgatcgcaagtggagggagtttgcggaccgtttggaggaggatgttcctggagctgagcctggggatgcagtggactaccgtgttcctcgacgtagaggcagacggccacctgcgcgGCCTAACCGTCGAGGTGCGCCTGACAGAGGACCATCCGAGCAGGGGGACGGCAGTCATCACGTGCCCGGTGAGGAGGTAGTTGGATCAGCATCAGCTATGGATCGGCCGACGTTCGAGGTGGGTACTAGCTCTCAGCTGTTTGGGAACGTTAGCCCACATGCTTTTTCTGAGTTTACTACCGCGGCTGTCGGGATAGACATTGATGATCCTGTTACTCAGTCCGAGTTCTACATGGACATAGCAGACATGCTTAGGGATGATGATGATACCCATTATAGGCCACTGATGCCTGAGGAGCATGCCCAGTTTGCTGATCAGCAGCCCAGGAGTGACGATGTTCAGGCTCAGTTGGCAGTGGACCTCAACGAGCCTGCAGTTTCTCCGTCTGACCCATGGTTTGCGTTAGGAGGGACACCTGCCTCTGCTTTCAGCGCCGTTCCCGCACAGCCCTCAGCACCAGCGGCAGATCACAGACCTAGGCGTGTGAGGCGTCCTCCTTTGTGTGGTACCGGAGGTCACCTGCTTGGCCAGTTCGACGATGATGACAGTGACACCATCGAGGATTCTGATTAG 2337 0.4763 MEDMIISPSSSSSLVSIPQENTPTLQQKLHFLLQNQLPEWWVYGIFWHTTNDDNGNLFLSWGDGHFQGAKDASSPRLIPHYPISATDRCRKFNNSNNNNDGEWFYVMSLTRTFPMGEASYSSLPGKAFGSGSPIWLNGDLQFCDCDRAKEAYMHGIRTLVHIPTTDGVLEMGSYDLITENWTLLQQTKSLFGSQHQQLNPIQFFDDQNISFADIGIIAGVQEEENSHEEDAVRKRKETEALNNKKKNKDHSSMGKFGSSRQSSFVDSEHSDSDCGAPMAAAEKRLPKKRGRKPGIGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEELETQVQKESSINNNNKKVKVETGDSMDNQSTTTTSSVDQNNNENEAAEVQVEVEVEVKMIGEEAAMVRVQSESGTHPGAKLLNALRELEFQVQHGSIWCVNESSIMLQHVLVKLPEGITMRTEQALKSAILSRLLDHHNQWDEFVPRNDAGAQRLLSARLALDRLRAHDAPPRVHVYDRPDNRRVDRCRRIGTRTTDRKWREFADRLEEDVPGAEPGDAVDYRVPRRRGRRPPARPNRRGAPDRGPSEQGDGSHHVPGEEVVGSASAMDRPTFEVGTSSQLFGNVSPHAFSEFTTAAVGIDIDDPVTQSEFYMDIADMLRDDDDTHYRPLMPEEHAQFADQQPRSDDVQAQLAVDLNEPAVSPSDPWFALGGTPASAFSAVPAQPSAPAADHRPRRVRRPPLCGTGGHLLGQFDDDDSDTIEDSD 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01291 778 MobiDBLite consensus disorder prediction 726 778 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 356 400 - -
Aip06g01291 778 PANTHER MYC 1 487 IPR045084 GO:0003700|GO:0006355
Aip06g01291 778 Coils Coil 337 364 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 222 253 - -
Aip06g01291 778 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
Aip06g01291 778 PANTHER TRANSCRIPTION FACTOR BHLH14 1 487 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 292 309 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 564 612 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 589 608 - -
Aip06g01291 778 CDD bHLH_AtAIB_like 296 360 - -
Aip06g01291 778 Pfam Helix-loop-helix DNA-binding domain 302 347 IPR011598 GO:0046983
Aip06g01291 778 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 191 IPR025610 -
Aip06g01291 778 MobiDBLite consensus disorder prediction 222 309 - -
Aip06g01291 778 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 360 IPR036638 GO:0046983
Aip06g01291 778 SMART finulus 304 353 IPR011598 GO:0046983
Aip06g01291 778 MobiDBLite consensus disorder prediction 254 269 - -
Aip06g01291 778 MobiDBLite consensus disorder prediction 358 400 - -
Aip06g01291 778 Gene3D - 297 363 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01291 Aip-Chr6 19712832 19720189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01291 1 487 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 33.162 4.48e-78 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip06g01291 bHLH-MYC_N 1e-40 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01291 - K13422 adu:107491832 921.768