Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01286 ATGGGCCAGTGCTACGGCAAGCCCAATCCCACCGCCGGTAACCACCATGACGTCGACCCAGCCGCCGCAATTGAGGCCTCCGGGGAAGCATTTCGCTCCCCGCTCCCCTCCTCCGCCGCCACCAACGGCTTCCCGTCGGTGAAGTACACGCCGGCGCGCTCGTCCTCACATGCGAGCCCATGGCCAAGCCCGTACCCTCACGGCGTGAACGCCAGCCCGTTGCCGGGGGACGGGGTGTCGCCGTCGCCGGCCAGGGGGACTACGCCGAGGAGGTTCTTCAGACGGCCGTTTCCTCCTCCGTCTCCGGCGAAGCACATAAGGGCGTCGCTGGCGAAGAGGCTGGGGCAGGGTAAGCCGAAGGAGGGGCCGATACCGGAGGATCGAGGGGCGGAGGCGGAGGCGGTGGCTGAGCAGTCTCTTGACAAGAGCTTCGGTTATGGAAAGAACTTTGGAGCTAAGTATGAGCTGGGAAACGAAGTGGGGCGAGGGCATTTTGGTCATACCTGCTCCGCCAGGGTGAAGAAGGGTGAGCTCAAAGACCAGCTTGTTGCTGTCAAAATCATTTCCAAGGCCAAGATGACCACGGCAATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGCTATTAAAAGCTCTATCTGGCCATAAGCATCTTGTCAAATTTTATGATGCTTACGAGGATGCCAACAACGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGGATTTTGTCAAGGGGGGGAAGATATACAGAGGAGGACGCCAAGGTTATAGTTTTGCAGATTCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTCCACCGTGACCTAAAGCCTGAGAATTTTCTCTTCACTTCAAGGAGCGAAGATGCTGATATGAAGCTTATAGATTTTGGTCTATCTGATTTCATCAGGCCAGATGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTAGAAGCAGATATATGGAGTATCGGTGTTATCACCTACATCTTACTATGTGGAAGTCGGCCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGTGCAGTGCTCAGAGCTGATCCCAACTTCGATGATCTACCCTGGCCAACTGTGTCTTCAGAGGCTAAGGACTTTGTCAAAAGGCTCTTAAACAAGGATTACAGGAAAAGAATGACCGCTGTCCAAGCACTGACTCACCCTTGGTTAAGGGATGACAGTCGTCCTATTCCATTAGATATATTAATTTATAAACTAGTGAAGTCATATCTTCATGCGACTCCATTCAAGCGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGACAGAGGATGAGTTAGTTTATCTTAGAGTACAATTCAGATTGTTGGAACCAAATAGAGATGGGCATGTCTCCCTTGACAATTTCAAAATGGCTCTTGCTCGTCATGCCACTGATGCCATGAGGGAGTCAAGGGTTCTCGAAATCATACATGCGATGGAACCACTTGCCCATAGGAAGATGGATTTCGAAGAATTTTGTGCCGCTGCTATTAGCACTTATCAACTGGAGGCACATGATAGGTGGGAAGATATTGCCAATACTGCTTTTGAGCATTTTGAGAGAGAAGGCAACCGTGTGATATCAGTTGAAGAGTTAGCAAGAGAGTTGAATCTTGGTCCTTCAGCTTATGCCATTCTCAAAGATTGGATACGAAATACTGATGGGAAGCTCAATTTACTTGGATATACAAAATTCTTACATGGCGTGACTCTCCGGTCAAACCCAAGACACCGATGA 1818 0.4945 MGQCYGKPNPTAGNHHDVDPAAAIEASGEAFRSPLPSSAATNGFPSVKYTPARSSSHASPWPSPYPHGVNASPLPGDGVSPSPARGTTPRRFFRRPFPPPSPAKHIRASLAKRLGQGKPKEGPIPEDRGAEAEAVAEQSLDKSFGYGKNFGAKYELGNEVGRGHFGHTCSARVKKGELKDQLVAVKIISKAKMTTAIAIEDVRREVKLLKALSGHKHLVKFYDAYEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSSEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDELVYLRVQFRLLEPNRDGHVSLDNFKMALARHATDAMRESRVLEIIHAMEPLAHRKMDFEEFCAAAISTYQLEAHDRWEDIANTAFEHFEREGNRVISVEELARELNLGPSAYAILKDWIRNTDGKLNLLGYTKFLHGVTLRSNPRHR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01286 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 599 - -
Aip06g01286 605 SUPERFAMILY Protein kinase-like (PK-like) 146 438 IPR011009 -
Aip06g01286 605 Pfam Protein kinase domain 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01286 605 Gene3D - 425 596 - -
Aip06g01286 605 Gene3D Phosphorylase Kinase; domain 1 148 242 - -
Aip06g01286 605 SMART serkin_6 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01286 605 ProSitePatterns Protein kinases ATP-binding region signature. 160 186 IPR017441 GO:0005524
Aip06g01286 605 PANTHER CDPK-RELATED KINASE 3 52 599 - -
Aip06g01286 605 Gene3D Transferase(Phosphotransferase) domain 1 243 424 - -
Aip06g01286 605 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Aip06g01286 605 ProSiteProfiles Protein kinase domain profile. 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01286 605 SUPERFAMILY EF-hand 442 595 IPR011992 -
Aip06g01286 605 CDD STKc_CAMK 153 415 - -
Aip06g01286 605 MobiDBLite consensus disorder prediction 1 104 - -
Aip06g01286 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Aip06g01286 605 MobiDBLite consensus disorder prediction 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01286 Aip-Chr6 19596584 19601665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01286 1 604 EF-hand Containing Proteins AT3G50530 58.860 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip06g01286 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01286 - - rcu:8266291 1009.59