Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01285 ATGGGGAAGAAGAGACAAGAGAAAGAGAGGTCGGTGCCGAAGGGGTGTCTGGCGATAAAGGTGGGTCAGGAGGGAGAGAAGCAAGAGAGGTTTGTGGTGCCACTCATTTACTTCAACCACCCTCTTTTCATGCAGCTTCTCAAGCACGCCGAGGATGAGTACGGTTTTCACCACAGGGGCGGCACCATCACCATCCCCTGCCATGTCCAACACTTCAGGCATGTTCAAGGCATCATTCATAGGGACTCTCTCTCCAACCACCGCAACTCTCCTCGCTGCTTTGGCTTCTCATGA 294 0.534 MGKKRQEKERSVPKGCLAIKVGQEGEKQERFVVPLIYFNHPLFMQLLKHAEDEYGFHHRGGTITIPCHVQHFRHVQGIIHRDSLSNHRNSPRCFGFS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01285 97 Pfam Auxin responsive protein 6 75 IPR003676 GO:0009733
Aip06g01285 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 5 87 - -
Aip06g01285 97 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01285 Aip-Chr6 19594383 19594676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01285 11 80 Calmodulin-binding Proteins AT3G43120 45.714 7.08e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01285 - K14488 vra:106754022 130.954