Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01272 ATGCCTGCAATGGTCATACTCTTGGTAGCCCTCGCCGTTCTGCTCCTCTTCTTCTCCTTCTCCAAGAAGCTATGGAGGGGCGTGGAAGACTGGTTCCACGTGTACCAGTTCTTGAAGGTCCCACAGCACAACCACACAACCTTGCAGGAGAATCATCTCTACAGAAAGGTCTCCCTCTACTTGCATTCTCTCCCTTCCATCGAAGACTCTGATTTCACAACACTCCTTACTGGCAAGAAGTATAACGACATCCTTCTCTGCCTCGGCCCCGACCAAACCATTCAGGACCGTTTTCTCGGAGCCACCGTCTTCTGGCACAACCAAACCGACGTCGACGACGGTGCTGATCAGAATCCCCAATTCAATCGCGCCAGAGCCTTCGTTCTCAAGATAAGAAAAGTGGACAAACGCCGAATCCTCCGCCCCTACCTTCAGCACATTCACGCCGTCGCCGACGATATTGAGCAGCAAGGGAACCGCGATCTGCGGCTATTCATGAACACCGCTGCCGCTGCACAGGGAAGAGGAAGGTGGAGATCAGTTCCTTTTACCCACCCCTGCACCTTTGAAACCCTTGCCATGGAGTCCGATCTCAAGAACCGGGTGAAATCCGACCTCGAATCGTTCCTCAGGGCGAAGCAGTACTACAACCGGCTTGGCCGAGTGTGGAAACGGAGCTTCCTCTTATACGGTCCTTCCGGAACCGGAAAATCGAGCTTCGTCGCTGCCATGGCCAATTTCCTTCGCTACGACGTGTATGACATCGACCTCTCCAAGGTTCCCAGCGATTCGGAtctgaaactgctcctactacagacgacgccgaaatcagtggtagtggtggaggACCTCGACCGGTTCCTGGCGGAGAAATCCACGGCGGTGAGCTCTTCAGGGATGCTGAACTTTATGGACGGAGTAGTGAGCTCGTGCTGTGGCGAGGAGAAGGTGATGGTGTTCACGATGAACAGCAAGGAACACGTGGATCCGAACCTTCTTCGGCCGGGTCGGGTCGACGTTCACATCCACTTTCCCTTGTGCGATTTCACGGCGTTCAAGACGATGGCGAATAACTACCTTGGAGTGAAGGAGCACAAGCTGTTCCCTCAGGTTCAAGAGATTTTCCAGAACGGCGCGAGTCTCAGCCCCGCCGAGATCGGCGAGTTGATGATCGCTAACCGAAACTCACCGAGTCGGGCCATCAAATCGGTGATCACCGCCTTACAAACGGACGGCGATGGGAGAGGGTCCGGGAGTCCGATCGTACGGCATACAGGGGAGGATGACGTGGACGAACCTGACGCTGTTATGTGTGGTGAGGGTCTCCACACGGTTAAGGATTTGCGTAAATTGTACGGCTTTTTCAGGTTGAAGAATACCAGAAGATCCCCCTCCTCCAACACCAGCTCAATGCCCAGCCCCTTGAGATGA 1431 0.5241 MPAMVILLVALAVLLLFFSFSKKLWRGVEDWFHVYQFLKVPQHNHTTLQENHLYRKVSLYLHSLPSIEDSDFTTLLTGKKYNDILLCLGPDQTIQDRFLGATVFWHNQTDVDDGADQNPQFNRARAFVLKIRKVDKRRILRPYLQHIHAVADDIEQQGNRDLRLFMNTAAAAQGRGRWRSVPFTHPCTFETLAMESDLKNRVKSDLESFLRAKQYYNRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLRYDVYDIDLSKVPSDSDLKLLLLQTTPKSVVVVEDLDRFLAEKSTAVSSSGMLNFMDGVVSSCCGEEKVMVFTMNSKEHVDPNLLRPGRVDVHIHFPLCDFTAFKTMANNYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIKSVITALQTDGDGRGSGSPIVRHTGEDDVDEPDAVMCGEGLHTVKDLRKLYGFFRLKNTRRSPSSNTSSMPSPLR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01272 476 Gene3D - 180 343 IPR027417 -
Aip06g01272 476 Pfam ATPase family associated with various cellular activities (AAA) 228 346 IPR003959 GO:0005524|GO:0016887
Aip06g01272 476 SMART AAA_5 223 348 IPR003593 -
Aip06g01272 476 MobiDBLite consensus disorder prediction 410 432 - -
Aip06g01272 476 Pfam Domain associated at C-terminal with AAA 22 106 IPR025753 -
Aip06g01272 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 407 IPR027417 -
Aip06g01272 476 PANTHER BCS1 AAA-TYPE ATPASE 6 432 - -
Aip06g01272 476 CDD AAA 224 346 - -
Aip06g01272 476 Gene3D - 344 408 - -
Aip06g01272 476 PANTHER BNAC04G00800D PROTEIN 6 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01272 Aip-Chr6 19180174 19181604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01272 - K08900 gmx:100805212 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01272 06 19180174 19181604 Aip02g00376 02 5029810 5031015 PCT