Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01269 ATGAACCAGGAAATGAATGGGATTGAGGGTGAGAGAGCAAGGGAGAATAATGATAACAATAATGTGAATGTGCCAGAGAGAATAGATTATGTGTTCAAGGTGGTTGTGATTGGAGACTCAGCAGTGGGGAAGACTCAAATACTGTCTAGGTTTGCAAAGAATGAGTTCTGCTTTGACTCAAAGTCCACCATCGGCGTTGAGTTCCAGACCAGGACTGTCACCATTGGTGGCAAACTCATCAAGGCACAGATCTGGGACACTGCTGGCCAAGAAAGGTACAGGGCAGTGACAAGTGCGTACTACAGAGGAGCATTAGGGGCAATGGTGGTGTACGACATAACAAAGAGGCAGACATTTGATCACGTGGCGAGGTGGATAGAGGAGCTGAGGGCGCATGCAGACACTTCCATAGTCATAATGCTAATTGGGAACAAGGGTGACCTTGTGGAGAAGAGAGCAGTGCGGACGGAGGATGCGGTGGAGTTTGCGGAGGAACAGGGGCTCTTCTTCTCGGAGACTTCAGCTCTCAGCGGTGAGAATGTGGAGAGTGCCTTCTTCAAGTTGCTTCAACACATCCATTTCGTGGTCTCTAAGAAGTCCTTGCAATCTGCCAACAATGCCATTAATAATGCTGTCACTCTTAAGGGATCAAAGATTGATGTAATCTCTGGTAATGACTTAGAGTCAGAGATTACTGAGATTAAGAAAGTCTCTTCATGCTCTTGTTGA 729 0.4678 MNQEMNGIEGERARENNDNNNVNVPERIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTIGGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRQTFDHVARWIEELRAHADTSIVIMLIGNKGDLVEKRAVRTEDAVEFAEEQGLFFSETSALSGENVESAFFKLLQHIHFVVSKKSLQSANNAINNAVTLKGSKIDVISGNDLESEITEIKKVSSCSC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01269 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 207 IPR027417 -
Aip06g01269 242 SMART rab_sub_5 32 195 - -
Aip06g01269 242 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g01269 242 SMART ras_sub_4 29 195 - -
Aip06g01269 242 TIGRFAM small_GTP: small GTP-binding protein domain 31 185 IPR005225 GO:0005525
Aip06g01269 242 Gene3D - 25 222 IPR027417 -
Aip06g01269 242 PANTHER RAS-RELATED PROTEIN RABA3 1 242 - -
Aip06g01269 242 CDD Rab11_like 29 193 - -
Aip06g01269 242 PANTHER - 1 242 - -
Aip06g01269 242 SMART rho_sub_3 34 198 IPR001806 GO:0003924|GO:0005525
Aip06g01269 242 ProSiteProfiles small GTPase Rab1 family profile. 27 240 - -
Aip06g01269 242 SMART ran_sub_2 37 234 - -
Aip06g01269 242 PRINTS Transforming protein P21 ras signature 32 53 - -
Aip06g01269 242 PRINTS Transforming protein P21 ras signature 55 71 - -
Aip06g01269 242 PRINTS Transforming protein P21 ras signature 73 95 - -
Aip06g01269 242 PRINTS Transforming protein P21 ras signature 135 148 - -
Aip06g01269 242 PRINTS Transforming protein P21 ras signature 170 192 - -
Aip06g01269 242 ProSiteProfiles small GTPase Ras family profile. 26 242 IPR001806 GO:0003924|GO:0005525
Aip06g01269 242 Pfam Ras family 33 192 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01269 Aip-Chr6 19063235 19064911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01269 K07904 - gmx:100787725 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01269 06 19063235 19064911 Aip02g00375 02 5013971 5024811 PCT