Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01263 ATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGATAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACGCCCGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTGGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCATATAGCGAATGCAAGAATCCAGCTCAAATTTACAAGAAAGTTACCTCTGGCATCAAACCGAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCCTGCATCTGAGAGGTTGTCTGCAGAGGAGCTTCTTAAAGATCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAATCCTTAATCCCTTAAACTCACCTAATAAATCTCCAAAGGCTATAGATAGGCCGAAATCTGGTCCTTTATCTATAGACTTCGAGGCTGACTCCAAACATGTGTCTGTGTTTACCTGTGCTGAAAACAGCCATGGAAGTTCACATTGTCCACTTCTGGAAGTTCGGCGTACATATAAAAACAATGAGTTTAAATTGAAAGGGACCAAAAATGATGATAACTCGGTGTCATTAATCTTGCGTATTGCTGATTCTTGCGGTCAAGTAAGGAATATACATTTCCTCTTCTACCTTGAGACAGATACTGCAGTTTCTGTGGCATCAGAGATGGTTGAAAATTTGGAGCTGCCCGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCAGTGTAAGCCGTCGAATGAAGGAAATAGTCATAGTCAGTGTCCTGTGCCAAGCAGTGCTCGCACTGAAGTGATTTTTTATCAAGACAACGCACAGTGTCCTGTCCAAACCAATGCTCCCTCTGAATTGGTTTTCAATCAAGAGAACTCGACTCCAGTTGATTCTAACCAAGCAGAAGATTTTGATACAGCCAACAGAAGCTTCGTGTTTAACAATGGTGATAATGCTGCTTTTGTTGGTGAGTATAATTCTTCTCTGAGTTTGAGTAGCTTGGAAGATCAAGATTGGCAAGAACCGGCAGAGGCTGATATAGCCATTGAAGATGCTTGCACGAAAAATGAATACTGTCTTGATTCTGATGCTGATAGGAGTGAGAAGGGATTAAGTTGGTCAACCTTAGAAATGAAGCTGGCTGATACATTCTGGGAATGTTGTAAATTGCAGGCTACAAACTGTGCTGCCGAAAGCATTGTACTGAAAGGAATCTCAAAGAACTCTTCTCACTCTACAATCCCAGCCTTTTGGGGAACACCTAATGCTTTGAGCTTGACAAGCAGCAATTCTTCTTTGTCTCCAACCGACAAAGACATCGATCACGAGCTAGAGCATGAACTCGATGCGATCGAATCACACTATGAGCTTTGGTTCCAAGAACTTTCAAGACAGAAGTTGGAAGCATTGGAAGCCACCAGAAAGAAATGGACAGAAAGGAAGAAACTGATTGTTCATTGA 1638 0.4176 MKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVPASERLSAEELLKDPFLQVECSKDPILNPLNSPNKSPKAIDRPKSGPLSIDFEADSKHVSVFTCAENSHGSSHCPLLEVRRTYKNNEFKLKGTKNDDNSVSLILRIADSCGQVRNIHFLFYLETDTAVSVASEMVENLELPDHDVAFIAELIDYLIMKLLPQCKPSNEGNSHSQCPVPSSARTEVIFYQDNAQCPVQTNAPSELVFNQENSTPVDSNQAEDFDTANRSFVFNNGDNAAFVGEYNSSLSLSSLEDQDWQEPAEADIAIEDACTKNEYCLDSDADRSEKGLSWSTLEMKLADTFWECCKLQATNCAAESIVLKGISKNSSHSTIPAFWGTPNALSLTSSNSSLSPTDKDIDHELEHELDAIESHYELWFQELSRQKLEALEATRKKWTERKKLIVH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01263 545 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
Aip06g01263 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Aip06g01263 545 PANTHER KINASE DOMAIN PROTEIN 1 545 - -
Aip06g01263 545 Pfam Protein kinase domain 2 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01263 545 Gene3D - 239 324 - -
Aip06g01263 545 SUPERFAMILY Protein kinase-like (PK-like) 3 159 IPR011009 -
Aip06g01263 545 Coils Coil 519 539 - -
Aip06g01263 545 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 241 297 IPR024678 GO:0004674|GO:0005524
Aip06g01263 545 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01263 545 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01263 545 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01263 Aip-Chr6 18986928 18989530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01263 1 305 MAP Kinase Kinase Kinase AT1G49160 60.372 6.08e-127 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip06g01263 Pkinase 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01263 K08867 - gmx:100809602 601.668