Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01256 ATGGTAAGAGCTCCTTGTTGTTCAAAAGTTGGATTGCACAGAGGTCCATGGACTCCCCGAGAAGATGCATTACTCACCCAATATATTCAATCCCATGGGGAAGGCCAATGGAGATCACTCCCTAAAAGAGCTGGCCTTCTTAGATGCGGGAAGAGTTGCAGGTTGAGATGGATGAACTATCTGAGACCAGATATCAAGAGAGGCAACATAACACCCGAAGAAGACGACCTCATCATTAGAATGCATTCACTCTTAGGGAACAGGTGGTCCCTCATCGCTGGAAGGTTACCGGGAAGAACCGACAATGAAATAAAAAATTACTGGAACACCCACCTCAGCAAGAAGCTCCTCAGGAGTCAACCCAAGAAGAAGAAGCAGAAGAAGAAAGACGCACAAGCAGAGGAAGAGGAAGAGGCAGAGGCAAAGAAGAAGAACAAGACCGTCGTTTATTTACCCAAACCGATTCGAGTTATTCCAAGAACCAAAActgaaatttga 498 0.4498 MVRAPCCSKVGLHRGPWTPREDALLTQYIQSHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLLRSQPKKKKQKKKDAQAEEEEEAEAKKKNKTVVYLPKPIRVIPRTKTEI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01256 165 MobiDBLite consensus disorder prediction 127 145 - -
Aip06g01256 165 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aip06g01256 165 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aip06g01256 165 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aip06g01256 165 CDD SANT 16 61 IPR001005 -
Aip06g01256 165 SMART sant 66 114 IPR001005 -
Aip06g01256 165 SMART sant 13 63 IPR001005 -
Aip06g01256 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aip06g01256 165 MobiDBLite consensus disorder prediction 116 145 - -
Aip06g01256 165 Gene3D - 71 148 - -
Aip06g01256 165 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 146 - -
Aip06g01256 165 PANTHER MYB TRANSCRIPTION FACTOR 1 146 - -
Aip06g01256 165 CDD SANT 71 112 IPR001005 -
Aip06g01256 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aip06g01256 165 Gene3D - 14 66 - -
Aip06g01256 165 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aip06g01256 165 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aip06g01256 165 Coils Coil 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01256 Aip-Chr6 18896406 18897900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01256 4 146 MYB Transcription Factor Family AT3G13540 65.734 8.49e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip06g01256 Myb_DNA-binding 6.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01256 K09422 - gmx:778044 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01256 06 18896406 18897900 Aip02g00360 02 4807610 4809134 PCT