Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01221 ATGGAATATACTGAGAATGGGGAACATGGTCTCATCAATGAACTCATCCAAGGGAAGGAGCTAGCAAAGCAGCTATGCAATCTCCTCTCTTCTTCTTCTTCTTCATCATCCAAAGAAATCTTAATTGACAAGATACTTTCCACCTATGAGAAAGCCCTCACCATGCTCAACTCTGACTCCACCATTACCAATCTCATTAATTCCCATTCTTCTTCTTCTTCTATAAATGGGAGCCCTTCAAGGAGTGACCTCATTGATAATGATGAAGAATTCAAGGACAAACCCCCCCTCAAGAAGAGGAAGACTATGCCCAAATGGACAGAGAAAGTGAAAGTATGTTCAAAAACAGGACTTGAGGGATCTTTGGATGATGGGTATAGCTGGAGAAAATATGGACAAAAGGATATTCTTCGAGCCAAGTTCCCAAGAGGATATTACAGATGCACATACAGAAATGTACAAGGGTGCCTTGCAACAAAACAAGTTCAAAGATCAGATGTAGACCCAACAATGATTGAGGTGAACTACAGAGGAAGACACACGTGCACCCAATCTAAGCATTCCAACAAAGCGTTTCCATCAAAAACAATGTTGCCAGTGTTGGAGAAGAACCAATTCCACAAGTTCCAAAACAACCAACCTCAAAAGCAGGAGAAAATGGAACAAACCCAAGAGGAAATTTTCAACTTTGAACCAAAGCTTGAGTTGGACACTAACACCAACATCACAACCAAGGATGATGATATCTTCCCATGGTTCTGCTACCTTTCTCCTTCAATGGGATCCGAAAACGGTGATAACGACATGTTGTTATCTGATTCCATGTTCTTGGAAAGCTTTTCCTCTGATATAGCATCATTCATATCACCATCAACTTCAGAATCAGACCTTTTCTGTTTATCACCATGCCAATTTGGAAGCAGCAATAATAATGGAATAGTCCAATCCTCAGAATCTGATATAACTGAGATACTTTCAACTCCAACCTCAGTAACCAATTCCCCAATCATGGATTTCGATATGCTGCTTGATAAAGTGGATTTCGACACCATATTCCCTTCCAACACAACGGAATATTCTTCTTCATGA 1089 0.4031 MEYTENGEHGLINELIQGKELAKQLCNLLSSSSSSSSKEILIDKILSTYEKALTMLNSDSTITNLINSHSSSSSINGSPSRSDLIDNDEEFKDKPPLKKRKTMPKWTEKVKVCSKTGLEGSLDDGYSWRKYGQKDILRAKFPRGYYRCTYRNVQGCLATKQVQRSDVDPTMIEVNYRGRHTCTQSKHSNKAFPSKTMLPVLEKNQFHKFQNNQPQKQEKMEQTQEEIFNFEPKLELDTNTNITTKDDDIFPWFCYLSPSMGSENGDNDMLLSDSMFLESFSSDIASFISPSTSESDLFCLSPCQFGSSNNNGIVQSSESDITEILSTPTSVTNSPIMDFDMLLDKVDFDTIFPSNTTEYSSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01221 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 352 IPR044810 GO:0003700
Aip06g01221 362 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01221 362 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01221 362 MobiDBLite consensus disorder prediction 68 99 - -
Aip06g01221 362 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01221 362 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01221 362 MobiDBLite consensus disorder prediction 83 99 - -
Aip06g01221 362 Coils Coil 360 362 - -
Aip06g01221 362 Gene3D WRKY domain 108 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01221 362 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 4 352 - -
Aip06g01221 362 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01221 Aip-Chr6 17964307 17965590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01221 12 288 WRKY Transcription Factor Family AT5G24110 37.063 3.66e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g01221 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01221 - - gmx:100790050 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01221 06 17964307 17965590 Aip02g00310 02 4135821 4139951 PCT