Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01218 ATGGAGAAGAGGGAGTGGAAGGTATGCGTCACCGGCGGTGGCAGCTTCATTGGTTCTTACCTCGTTAACAAGCTTCTCCAAAAGGGCTACATAGTCCATGCAACCCTTAGAAGCTTAAAGGACGCAAAGACAGGCATTCTGAGAGGGTTTCCAGAGGCAAAAGAAAAGCTGGTGCTATTTGAGGCAGATTTGTACAGTCCACATCAATTTGAGGCTGCAATTCAAGGCTGTGACTTTGAATTATATGAAAATACGCAATATTAA 264 0.4432 MEKREWKVCVTGGGSFIGSYLVNKLLQKGYIVHATLRSLKDAKTGILRGFPEAKEKLVLFEADLYSPHQFEAAIQGCDFELYENTQY 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01218 87 Pfam GDP-mannose 4,6 dehydratase 10 79 IPR016040 -
Aip06g01218 87 Gene3D - 2 81 - -
Aip06g01218 87 PANTHER DIHYDROFLAVONOL-4-REDUCTASE-LIKE PROTEIN 7 79 - -
Aip06g01218 87 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 78 IPR036291 -
Aip06g01218 87 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01218 Aip-Chr6 17936640 17936999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01218 7 77 Monolignol Biosynthesis Gene Families AT1G76470 49.296 2.98e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01218 - - vvi:100241356 109.383