Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01203 ATGACGGAGTTCATAAATTTGCAAGCCGCTTATGACTACTACAACGAATACGGTCGCATTAAGGGATTCTCGATGAGGATGTTGAAGGTAGGTCGCAGAACAAAGCAAGGGTCGGAGGTTGAAATCATTTGGCAGATATTCATGTGCTCGAGGGAAGGAGAGCGAGAGGCGAAACACATGCAGCAGGAAGACAGGAAGATGGATCCTCGATCTATCACACGTGCGGTCAGGGGTTTCGAGATTGTTGGGTTCGAGATAAAAGATATCTATAATGCAATAGAGAAGCAAAGGAGGGTTGACGCGATAGATGTTGAGGCCGCGTTGAAGTTTTTGTCAAGTTTAAGGAGTAATGATTGTGGAATGTTCTGGAAGTACTTGCTGGATGCGTATGGTCGGAACAAATACAAATGTCATTTGGTAATATTCTCAGGGGTGAACCATTATATGAGGATGGTGGTGTTTGGTTGCGCAATTTTGAGCAATGAGAGAGAAGATAGCTGTGTGTGGTTGTTGCAGTCATTTCTTGAGGCAATGAAAGAAAACAGCCGAAGTCCGTCATGA 561 0.4439 MTEFINLQAAYDYYNEYGRIKGFSMRMLKVGRRTKQGSEVEIIWQIFMCSREGEREAKHMQQEDRKMDPRSITRAVRGFEIVGFEIKDIYNAIEKQRRVDAIDVEAALKFLSSLRSNDCGMFWKYLLDAYGRNKYKCHLVIFSGVNHYMRMVVFGCAILSNEREDSCVWLLQSFLEAMKENSRSPS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01203 186 PANTHER OS01G0607050 PROTEIN 3 180 - -
Aip06g01203 186 Pfam FAR1 DNA-binding domain 12 74 IPR004330 -
Aip06g01203 186 Pfam MULE transposase domain 130 181 IPR018289 -
Aip06g01203 186 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 180 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01203 Aip-Chr6 17601781 17602648 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g01203 FAR1 5.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01203 - - ahf:112777976 246.899