Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip06g01192 | ATGTCTCGACGCTGCTCTGAAGGCGAAGCCATCAATGAGTCCTACGTCTGTGCCACGTTGGCAATGGTCTTGGCAGCTGGTTTTGTCACCGACACCATTGGAATCCATGCTCTGTTTGGGGCATTTGTTGTTGGAGTGGTTCTTTCCAAGGAAGGCCCTTTTGCGGCTGCTCTTGTTGAGAAGGTTGAGGATCTTGTCTCTGGGGaccttagggacgatttcagtacttaa | 231 | 0.4632 | MSRRCSEGEAINESYVCATLAMVLAAGFVTDTIGIHALFGAFVVGVVLSKEGPFAAALVEKVEDLVSGDLRDDFST | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip06g01192 | 76 | PANTHER | CATION/H + ANTIPORTER | 1 | 68 | - | - | |
| Aip06g01192 | 76 | Gene3D | - | 1 | 70 | IPR038770 | - | |
| Aip06g01192 | 76 | Pfam | Sodium/hydrogen exchanger family | 9 | 67 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
| Aip06g01192 | 76 | PANTHER | CATION/H(+) ANTIPORTER 16 | 1 | 68 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip06g01192 | Aip-Chr6 | 17491260 | 17491692 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip06g01192 | 1 | 68 | Antiporter Super Family | AT5G41610 | 75.000 | 1.98e-31 | 112 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip06g01192 | - | - | ini:109164598 | 117.472 |