Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01178 ATGAATTGCTTTCCGTGCTTCACTTCTCAAAAAAGCAAGAAAAGCAGTAGCAGCAAGGATTTTTCTCCTCCTCCACAGGAACAGGAACAAGTTGTAGCAAGACCACCAGATATAAAGAAACCAAAGGCAGAAGACATAAACCAAGTAGACACATCGAATATTAAAGCACACAATTTCACATTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGGCAAGAAATGTTGATGGGTGAAGGTGGCTTTGGCAGAGTCTACAAGGGCACAATCCCTGCAACCGGCCAGGTTGTAGCAGTTAAGCAACTGGACCGAAATGGAATGCAAGGAGGAAGCAAGGAATTTCTGGTTGAGGTTTTGACTCTAAGCCTCATGAGCCATGAGAATCTCGTCAAACTCACTGGTTATTGTGCCGATGGTGATCAACGTCTTTTGGTGTATGAATTCATGCCTGCTGGCTCTCTAGAAAAGCGGCTTCTCGAGCGGGGACCGGAGCAACCTCCATTAGATTGGTACGTCAGAATGAAGATAGCATCTGATGCGGCAAAAGGACTATGGTACTTGCACGACATGGCGAATCCCCCTGTCATATTCAGGGACTTGAAATCCTCCAACATCTTGCTGGACAATGATAACAATGCAAAGCTATCCGATTACGGACTTGCAAAACTTGCTGGTAAAGATAAGATGAATATTGTTCCTACCAGAGTTATGGGCACCTATGGTTATAGTGCCCCTGAATACGTAAGAACAGGTCAACTCACCTTGAAGTCAGATGTCTATAGTTTCGGTGTTGTCTTGCTAGAGCTCATAACTGGACGCCGCGCAGTTGACACCACTAGACCCAACGACGAGCAAAATTTAGTTTCATGGGCGCAACCCATATTTAGAGACCCGAAAAAGTATCCAGAAATGGCAGATCCACTTCTGAAAGGCAAGTTTCCAGAGAAGGATCTGAATCAAGTTGTTGCAATAGCAGCCATGTGCCTACAGGAGGAATCAGCAGCGCGTCCTCTCATGAGTGATGTGGTGACTGCCCTCAGTTTTCTCTCAACAACTCCGCCTCCGGAGGCCAATCCTCAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCCGAGCCCGAGACCGAGCCTGAGCCTGAGCCTGTCCCTGCCCCTGCCCCTCTTTCTGCTGCGCGCTCGGCCAAGAGTGAAGCATCCGCAAGTGTGAGTGGCAGCGGTAGTGATAGCGGAAGTGATAGTGGAAGCTACAGCCAGAGCCAGAGCGATTATGATGGATCTGATGGTGAATCAGACTACTATGAAGAGGATGAAGATAAACGAAGCTACAGCCCACAAGATAGTATACAATCTAGGGAATTCTACTCCAAGTCAAGCCGCAAAAGCAGCACCAGATCATCGTCCAGGGCTCACAGCGATGTAACTTCGAATTCCGAAGATGAAAGGAGAGGACCATCCCCACGCAAAGCCAGTAGGAAACATTTAAGCCAGAAGATTAGCAAGAAGTCTTCCAGCAAGGAAAAAGAGTTAGGCCAGAATAGCAGTAAGAAAGCTGCTTCTCGGAAGAACAGAGAATTAAAGCAGAAGAGTAGCAGAAACAAAGATAGAGAATTGAGCCAAAAGAGCAGTAAGAAAAAACCATCATCTTCTTCAAAGAGGAGAACCGGGGTGGGACCAGAGGAGTCAAAGTCAAGGGATGAAGGTGAAGCCATGCTTAGTGAGAGATCATCACGAGAGGATATATCTTACGGTCACGACAACCAAGAGAGTAGTGAGAGCATCCCATTCGAGTATGAAAGCAGCAAGGAACCATCAGCTATCCCGCCATTGCCACCAACAGCAAGCACTCTCACATAA 1860 0.4753 MNCFPCFTSQKSKKSSSSKDFSPPPQEQEQVVARPPDIKKPKAEDINQVDTSNIKAHNFTFRELATATKNFRQEMLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGMQGGSKEFLVEVLTLSLMSHENLVKLTGYCADGDQRLLVYEFMPAGSLEKRLLERGPEQPPLDWYVRMKIASDAAKGLWYLHDMANPPVIFRDLKSSNILLDNDNNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGQLTLKSDVYSFGVVLLELITGRRAVDTTRPNDEQNLVSWAQPIFRDPKKYPEMADPLLKGKFPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTTPPPEANPQPEPEPEPEPEPEPEPETEPEPEPVPAPAPLSAARSAKSEASASVSGSGSDSGSDSGSYSQSQSDYDGSDGESDYYEEDEDKRSYSPQDSIQSREFYSKSSRKSSTRSSSRAHSDVTSNSEDERRGPSPRKASRKHLSQKISKKSSSKEKELGQNSSKKAASRKNRELKQKSSRNKDRELSQKSSKKKPSSSSKRRTGVGPEESKSRDEGEAMLSERSSREDISYGHDNQESSESIPFEYESSKEPSAIPPLPPTASTLT 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01178 619 MobiDBLite consensus disorder prediction 501 544 - -
Aip06g01178 619 SUPERFAMILY Protein kinase-like (PK-like) 57 371 IPR011009 -
Aip06g01178 619 MobiDBLite consensus disorder prediction 349 619 - -
Aip06g01178 619 MobiDBLite consensus disorder prediction 557 587 - -
Aip06g01178 619 MobiDBLite consensus disorder prediction 1 25 - -
Aip06g01178 619 PANTHER OS07G0668900 PROTEIN 1 562 - -
Aip06g01178 619 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 562 - -
Aip06g01178 619 SMART serkin_6 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01178 619 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Aip06g01178 619 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01178 619 MobiDBLite consensus disorder prediction 363 379 - -
Aip06g01178 619 CDD STKc_IRAK 77 346 - -
Aip06g01178 619 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Aip06g01178 619 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01178 619 MobiDBLite consensus disorder prediction 396 428 - -
Aip06g01178 619 MobiDBLite consensus disorder prediction 448 474 - -
Aip06g01178 619 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01178 Aip-Chr6 17349393 17351986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01178 1 380 Glycoside Hydrolase AT3G07070 60.870 1.30e-164 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aip06g01178 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01178 - - ahf:112759084 679.093