Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01177 ATGCAAGCACACTCGTGTGGCTTTGACGCGTTGTTCATGGACAAGGAAATCTACCATTGCTCCAACTTGGCTATGCAAGATGTTGCATCCATGCCGCAGTACCAAGATACCTTGAACCAATGCTCACACTTCGATCAACCGTTTGTTGAGGCATGTCCCAATTGTACCACTGCAATATTGAGCCTGAGAGACGCTTTGAACGGAGGCAACGGAGATGGCCCAGACAGAGCCGTATGCGGGGTGGCAGCTCTTGTTGCTGTTATGGGTGGCAAACAAAATGACCCATCTCTCGCTGACAAATTCTTACGCTGCTTGCCGCCGATTTCGGTCAAAAAATCAAAATATTCGGCAAGTCTAGTGTTAATAAGCGTGCCAGTAGTGGTGGTAGTATTGTTGTTGATAGCTCTACTGGTAAAGTATACACTCAAGAAGAAGAAGCAGCCATTGAGGCCATTTCAATTGAAGGAGATAACATCATGGGCAGGACTATACTGCTTCACGAAACAAGAAATCGAAAAGGCAATGAATTACAGGGATGAGAAGATATGCCTAGGACGCGGAAGTGCCGGGCAGGTTTACAGAGGCGTTCTCCCCAGCGGTCAGCTTGTTGCCATCAAGCATTTGACCAAGAGCAGCCCTTCTGATTCATTCACTCGGGAGATTCAAGGCCTTTCTAGACTTCGCCATCCGAACCTTGTTTGTCTTTTTGGTTGTTGCATTGAAGGTGACGAGAAATATTTAGTTTATGAATTTTGTGCTAACGGAAATCTAGCTCAACATCTACTAAAAAAAGACTGCCATTTGAATTGGGAAACAAGAGTGAAAATTTTGAGGGATTGTTCATTTGCACTAAAGTATCTCCACTATCATATAGAAGGCTGCGTTGTCCATAGAGATATAAAGCTGACAAACATACTTCTGACGGAGGAATACCAAGCGAAACTGTCGGATTTCGGATTGGCAAGGATGATGGGGGTAGAAGAGAGCAAGGTATTCACAGACATTAGAGGGACAATAGGGTACATGGATCCTGAGTACATGAGCAATGCGAAGCTAACCTGTGCAAGTGACGTGTACAGCTTTGGGATTGTGGCTTTACAAATCCTTTCAGGACAGAAAGTGATAGAGATGGATCTTGATGCAAGAGACCAGCTGACCAGAAAGGCTCGAGATGTAAGTATGGGAAAGCGTCCGCTGAGAGATTTTGAGGACCCGAGGCTAGGAGGCGAGGTTAACAAGGCGAACTTCGAATCCATATTGCACATAGCGGTTCTGTGTATTGCAAAACACGGCAAGAATCGTCCAACTATTGAAGTTATCTTTGACGAGCTCGACGCCGTCTATAGGGACACCCGTTTACGCATCTCCGCCGGAAAGCAAGACAATAATAAGCGCCCGCCATCGTCGTCAACTCCATCCACCAGCTCAAGCTCCAAGTCCCCCAAACAGATCTCTGTTTGA 1461 0.4606 MQAHSCGFDALFMDKEIYHCSNLAMQDVASMPQYQDTLNQCSHFDQPFVEACPNCTTAILSLRDALNGGNGDGPDRAVCGVAALVAVMGGKQNDPSLADKFLRCLPPISVKKSKYSASLVLISVPVVVVVLLLIALLVKYTLKKKKQPLRPFQLKEITSWAGLYCFTKQEIEKAMNYRDEKICLGRGSAGQVYRGVLPSGQLVAIKHLTKSSPSDSFTREIQGLSRLRHPNLVCLFGCCIEGDEKYLVYEFCANGNLAQHLLKKDCHLNWETRVKILRDCSFALKYLHYHIEGCVVHRDIKLTNILLTEEYQAKLSDFGLARMMGVEESKVFTDIRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIEMDLDARDQLTRKARDVSMGKRPLRDFEDPRLGGEVNKANFESILHIAVLCIAKHGKNRPTIEVIFDELDAVYRDTRLRISAGKQDNNKRPPSSSTPSTSSSSKSPKQISV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01177 486 Gene3D Transferase(Phosphotransferase) domain 1 252 468 - -
Aip06g01177 486 Pfam Protein kinase domain 183 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01177 486 MobiDBLite consensus disorder prediction 455 486 - -
Aip06g01177 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Aip06g01177 486 MobiDBLite consensus disorder prediction 461 486 - -
Aip06g01177 486 Gene3D Phosphorylase Kinase; domain 1 139 251 - -
Aip06g01177 486 SUPERFAMILY Protein kinase-like (PK-like) 159 443 IPR011009 -
Aip06g01177 486 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 75 462 - -
Aip06g01177 486 SMART serkin_6 177 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01177 486 PANTHER OS01G0750732 PROTEIN 75 462 - -
Aip06g01177 486 ProSiteProfiles Protein kinase domain profile. 178 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01177 Aip-Chr6 17316063 17317828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01177 74 438 Receptor kinase-like Gene Family AT5G10530 35.958 2.42e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Aip06g01177 Pkinase 9.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01177 - - gmx:100807158 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01177 06 17316063 17317828 Aip02g00170 02 2633731 2636407 PCT