Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01169 ATGTCTACATACGGGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTTATTTATGAACCGAATTCACATGATGATGTTGAAGATGATGATGTTGATTCGTTAGATTTTACTAACAAGAGTGAACATGATTGTGATGTTAAAAGAATATCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGCTTTGTAATGAGAAAGGATGACATCGTTAGTGATAGGGAAAGTAAAATCATTTGTAGGCAACTTGTTTGCAATAAAGAGGACTGCAGGAATATGAGATATCTTGATCTGGAGAATAGATCATGGGAGGCAAGGTCAATCACACGAATTAAGTGCCCAGCACGGCTTAAGGTTAAGGTTGACTACGGTTGTGGTAGATAG 450 0.3733 MSTYGDDVKNDSDNDLGDDFIYEPNSHDDVEDDDVDSLDFTNKSEHDCDVKRISDLMVEDIWNLEFRTEDEACQFYNAYACWHGFVMRKDDIVSDRESKIICRQLVCNKEDCRNMRYLDLENRSWEARSITRIKCPARLKVKVDYGCGR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01169 149 Pfam FAR1 DNA-binding domain 74 144 IPR004330 -
Aip06g01169 149 MobiDBLite consensus disorder prediction 8 24 - -
Aip06g01169 149 MobiDBLite consensus disorder prediction 1 34 - -
Aip06g01169 149 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01169 Aip-Chr6 17098359 17098808 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g01169 FAR1 6.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01169 - - aip:107646409 311.997