Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01138 ATGCAAGCACGAGAAACAACCGGCCTAGCGGGTGAAGCGGGCGATGGTGGCATGTTCGCGGTGGATAAAGGTCTGCTTGGGAGTTCGGAGCCTTTTCTTCGCCACTGTCTCTCAACTCTCAAGCTCAGATTCATTTCAAATCCAAGGGAACTTGGGTCAAATCTGATAAAGATGTCGAATCCAAAAGTTTTCTTTGACATTGCAATTGGAAGGATGAAAGCAGGGAGAATAGTAATGGAGCTGTTTGCTGATGTAACACCAAAAACAGCTGAAAACTTCAGGGCTCTATGCACCGGAGAGAAGGGGATTGGAAACTCTGGGAAACCTTTGCACTACAAAGGGTCTTCGTTTCACCGAATTATTCCTCAGTTTATGTGTCAGGGTGGAGATTTTACCAGAGGGAATGGGACTGGTGGAGAGTCAATTTATGGTTCTAAATTCGCCGATGAGAATTTCAAGTTGAAGCATACAGGACCTGGTATGCTTTCCATGGCAAATGCAGGGCCCCATACAAATGGTTCTCAGTTTTTTATATGTACTGCCAAGACTGAATGGCTTGATGGGAAGCATGTTGTGTTTGGAAAAGTTATTGATGGGTACAGTGTGGTTAAGGAGATGGAGAAGGTTGGTTCAAATGCTGGGAAGACATCTGAACCGGTTGTTATAGAAGATTGTGGTCAGATAGCAGAGAATTGA 696 0.4468 MQARETTGLAGEAGDGGMFAVDKGLLGSSEPFLRHCLSTLKLRFISNPRELGSNLIKMSNPKVFFDIAIGRMKAGRIVMELFADVTPKTAENFRALCTGEKGIGNSGKPLHYKGSSFHRIIPQFMCQGGDFTRGNGTGGESIYGSKFADENFKLKHTGPGMLSMANAGPHTNGSQFFICTAKTEWLDGKHVVFGKVIDGYSVVKEMEKVGSNAGKTSEPVVIEDCGQIAEN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01138 231 CDD cyclophilin_ABH_like 61 226 - -
Aip06g01138 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 230 - -
Aip06g01138 231 SUPERFAMILY Cyclophilin-like 55 228 IPR029000 -
Aip06g01138 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 96 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 66 226 IPR002130 GO:0000413|GO:0003755
Aip06g01138 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 112 129 IPR020892 GO:0003755|GO:0006457
Aip06g01138 231 Gene3D - 51 231 IPR029000 -
Aip06g01138 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 59 230 - -
Aip06g01138 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 64 227 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01138 Aip-Chr6 16549829 16551704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01138 75 209 U-box Gene Family AT5G67530 49.265 9.23e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01138 K01802 - zju:107412176 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01138 06 16549829 16551704 Aip06g01138 06 16549829 16551704 ECH