Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01136 ATGGCTCCTCCACCACCCAATGGTTATCGTCACGAAACGATGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTCCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACCGTGAGCAAGAAGTTGAAGGTGGAGGAGAAGTGGTCGAATGAAGACGTGGACTTACTCCACGATATCAGTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGTGGTGCGGGAAAGTCAACGTTCTTGGACGGACTTGCTGGGAGGATCAAGAGTGGGAGCCTGAAAGGAAGGATTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTGTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCGCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGTGGAGAGCGGCGGAGAGTGTCAATAGGAGTGAACATCATCCACGGTCCGTCCCTTCTCTTCCTAGACGAGCCAACCTCCGGGCTGGACTCCACAAGCGCACACAATGTGATCGAAAAGGTTCACGACATTGCACGCAGCGGCAGCACCGTCATCCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATTCTCGCCAGGGGCCAGCTCATGTACCAAGGCTCACCTAATGACGTCACGCAACATTTGACTCGCATGTCCCGCAGGGTACCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACTGGAATGAAGCCCCCTCTGTTGAAGGAGGGTGTGTCTGTCGAGCCGTCGCCGTCGCTCGTGAGGGCACGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTATCTGGGACATCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGGTCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGTAGTCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAAAGAGTCCAAGCCACACAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGTGAGATCCTGGCAGCGACACCAACCCCTCACAGCAGTGACTACACTGTGAACGAAAACGACTATCTCACCCCAACAACCGGCGCTGCCACGCCAGAGCACCTGGCTCCAAAATTCGCCAACTCCTTCCTCTCGGAAACCTGGATCCTGATGCGGCGCAACTTCATCAACATCCGAAGAACCCCAGAGCTGTTCCTGTCACGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATGTTCCACAACCCCAAACAGAATCTTCAGGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGACGCCGTCCCTGCCTTCATCCAAGAACGCTTCATCTTCATTAGAGAAACCTCTCACAATGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCTGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCCGCTGTCATTGCTTTCACTGCCTTGTTCTTCTTGTTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTATTGGCGGTGGATGAACAAAATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGACACAACAATAGCATCAACATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGGAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGTCCCGCCGCTCGCAGCCAGCAGCCACGCCAACCACCGCAGCCATCTCAACCCCGCAGCTCCGTTGCATGTACAGGCATCGCATGTGGAAGATCGGCGCCGTCGCAGGAGCTTGAAGTCCTCTCCTCTGTTTGAGAGCGCTCTCTCTGTGTTCACCGTGCCTCCGTCACCGTCACTGTAA 2313 0.5115 MAPPPPNGYRHETMIDIKNSNKTAQQTVGSSGGLEFWNLTYTVSKKLKVEEKWSNEDVDLLHDISGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRISLDGASVSASLIKRTCAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVNIIHGPSLLFLDEPTSGLDSTSAHNVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMYQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPLLKEGVSVEPSPSLVRARHGRGYEEKSLEVSGTSQVSRRVADEYGHSLRSPYNKNSQSWSSSHSAMFLKFTPSRLRNKESKPHNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPTTGAATPEHLAPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNSINITGFGILNNLHIGTEEYKKWENVGIMLVPPLAASSHANHRSHLNPAAPLHVQASHVEDRRRRRSLKSSPLFESALSVFTVPPSPSL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01136 770 Pfam ABC transporter 61 212 IPR003439 GO:0005524
Aip06g01136 770 Pfam ABC-2 type transporter 241 298 IPR043926 GO:0140359
Aip06g01136 770 SMART AAA_5 70 269 IPR003593 -
Aip06g01136 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 278 IPR027417 -
Aip06g01136 770 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 284 IPR003439 GO:0005524
Aip06g01136 770 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Aip06g01136 770 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 712 - -
Aip06g01136 770 MobiDBLite consensus disorder prediction 332 354 - -
Aip06g01136 770 Pfam ABC-2 type transporter 466 671 IPR013525 GO:0016020|GO:0140359
Aip06g01136 770 CDD ABCG_EPDR 34 266 - -
Aip06g01136 770 Gene3D - 42 313 IPR027417 -
Aip06g01136 770 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 10 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01136 Aip-Chr6 16528739 16532173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01136 54 298 Calmodulin-binding Proteins AT2G36910 25.403 8.00e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01136 K05681 - gmx:100804809 1039.25