Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01128 ATGTGTGAAGCCTTGCAGAGACGATACCAATTGCTGGAGGAGATTGGTCGTGGTAGATTCGGCACTGTGTTTCGCTGCTTCGACCCTAACTCCGGTGAGTTTCTCGCATGCAAGGTTATCGATAAGGGTCTTCTTCTTGACCCCACCGATCGTGCCTGCATCGAAAACGAATCCAAGTTCATGACTTTTCTTTCCCCACACCCTAACATTGTTAAGATTTTCGGAGCCTATGAGGATTCCGATTCTCTCTCCATCGTCGCTGAGCTTTGCGAACAAGAAACCCTATTCGACCGAATTGCTGATCGACCTTTGCCGGAGATAGAGGCCGCCGCCGTAATGAAACAGCTTCTTGAGGCGGTGGCGCATTGCCACAGGCTGGGGATAGCACACAGGGACATAAAACCAGATAATTTGCTTTTCGATAGAAGGGGGAATCTGAAAGTTGCGGACTTTGGTTCGGCGGAGTGGTTCGGCGACGGAAGAGGGATGAGTGGGGTGGTGGGGACGCCGTATTACGTGGCGCCGGAGGTGGTGATGGGGAGGGAATACAGTGAGAAAGTTGATGTTTGGAGCTCCGCTGTGATTCTTTACATAATGTTGGGTGCTATTCCACCATTCTATGGAGAGAATGCTTCTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTTAGATTCCCAACTACCATCTTTAGGTCTGTTTCTTCTTCTGCTAAGGATCTTCTCAGAAAGATGATTTGCAAGGATCCTTCAAGGAGAATTTCAGCAGAGCAAGCATTAAGGCATCCATGGATCTTGAGTGGAGGAGGTGTGACTAGTGATCTGAACTGA 828 0.4867 MCEALQRRYQLLEEIGRGRFGTVFRCFDPNSGEFLACKVIDKGLLLDPTDRACIENESKFMTFLSPHPNIVKIFGAYEDSDSLSIVAELCEQETLFDRIADRPLPEIEAAAVMKQLLEAVAHCHRLGIAHRDIKPDNLLFDRRGNLKVADFGSAEWFGDGRGMSGVVGTPYYVAPEVVMGREYSEKVDVWSSAVILYIMLGAIPPFYGENASEIFEAVVRANLRFPTTIFRSVSSSAKDLLRKMICKDPSRRISAEQALRHPWILSGGGVTSDLN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01128 275 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01128 275 PIRSF ILK 4 260 - -
Aip06g01128 275 CDD STKc_CAMK 8 263 - -
Aip06g01128 275 Gene3D Transferase(Phosphotransferase) domain 1 2 273 - -
Aip06g01128 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 271 - -
Aip06g01128 275 SUPERFAMILY Protein kinase-like (PK-like) 7 266 IPR011009 -
Aip06g01128 275 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01128 275 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aip06g01128 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Aip06g01128 275 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 271 - -
Aip06g01128 275 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01128 Aip-Chr6 16404639 16406038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01128 3 267 EF-hand Containing Proteins AT4G04720 43.123 2.44e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip06g01128 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01128 - K08794 gmx:548089 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01128 06 16404639 16406038 Aip06g01128 06 16404639 16406038 ECH