Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01119 ATGCGGCTAGAACCAATGGGATCGCATTTCTTCCTCCTCGTCCGCAAATCCGCCAAGCAATGCAAGGCTCGCTGGTACGAGTGGCTCGATCCTTCCATCAAAAAGACTGAGTGGACAAGAGAGGAGGATGAGAAATTGCTTCATCTTGCGAAGCTTATGCCAACACAGTGGAGAACAATTGCTCCCATTGTTGGATGTACCCCTTCCCAGTGCCGCGAGCGCTATGAGAAGCTCCTCGATGCGGCTTGTGTTAAGGATGACAACTATGAGCCTGGCGAGATTGATCCCAATCCTGAGTCAAAGCCTGCACGTCCAGATCCTGTTGACATGGATGAGGATGAAAAGGAGATGCTTTCTGAGGCTCGAGCTCGGCAGCGCAGGAGGAAACGGAAAGGAATTGACTATAATGCAGAGATTCCCTTTGAGAAGAGGCCTCCTCCGGGGTTTTTCGATGTACTGATGAGGACAGACCAGTGGAACAGCCCCAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAAAGAAGGATTGATGTCAAGGCACAGTTAA 549 0.5009 MRLEPMGSHFFLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGCTPSQCRERYEKLLDAACVKDDNYEPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARQRRRKRKGIDYNAEIPFEKRPPPGFFDVLMRTDQWNSPSSLLQLKNLREKEGLMSRHS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01119 182 SMART sant 34 81 IPR001005 -
Aip06g01119 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 83 IPR017930 -
Aip06g01119 182 MobiDBLite consensus disorder prediction 87 123 - -
Aip06g01119 182 SUPERFAMILY Homeodomain-like 13 82 IPR009057 -
Aip06g01119 182 Gene3D - 30 86 - -
Aip06g01119 182 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 12 124 - -
Aip06g01119 182 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 124 162 - -
Aip06g01119 182 CDD SANT_CDC5_II 31 82 - -
Aip06g01119 182 MobiDBLite consensus disorder prediction 87 140 - -
Aip06g01119 182 Pfam Myb-like DNA-binding domain 38 91 - -
Aip06g01119 182 ProSiteProfiles Myb-like domain profile. 30 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01119 Aip-Chr6 16301055 16302042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01119 12 172 MYB-Related Transcription Factor Family AT1G09770 62.150 8.65e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip06g01119 Myb_DNA-bind_6 3.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01119 K12860 - rcu:8258621 258.07