Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01098 ATGCTTTTCAGATCAAATTATGATTGTGAAGCTGTTCAGCTTAAAGAAAAATTACAAACGCTTGAAAAGGGTTGCCAGGAAATGAGGGCTAGTGGCCTGTTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGAAAACCGGATGAATGCCGTAACTTACAGGGAAAATGCACAAGGCTTCAACCTAAGTGCTCTTAGGAAGCTTTCTGATGTTAAAAGCATTGATGGGAATACTAGTTTGCTTCACTTCATTGTAGAGAAGGTGGCTCAGTCAGGAGGAAGAAGAGAAGCTATAAATCAAAAGCATAACATTCCCAAAATAAATGGTGATATAAGCAACTCCAAAGAAAAATAA 354 0.3814 MLFRSNYDCEAVQLKEKLQTLEKGCQEMRASGLLLKFLEAILKAENRMNAVTYRENAQGFNLSALRKLSDVKSIDGNTSLLHFIVEKVAQSGGRREAINQKHNIPKINGDISNSKEK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01098 117 Coils Coil 4 31 - -
Aip06g01098 117 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 117 IPR015425 -
Aip06g01098 117 Gene3D Formin, FH2 domain 1 108 IPR042201 -
Aip06g01098 117 PANTHER FORMIN-LIKE PROTEIN 1 113 - -
Aip06g01098 117 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 93 - -
Aip06g01098 117 Pfam Formin Homology 2 Domain 1 90 IPR015425 -
Aip06g01098 117 PANTHER FORMIN-RELATED 1 113 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01098 Aip-Chr6 16149044 16149397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01098 1 114 FH2 protein (formin) Gene Family AT1G59910 58.772 9.17e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01098 - - aip:107618940 196.052