Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01077 ATGATGCAGGGGACTCCAGTGAATATCATTGTGGGGTCTCACGTCTGGGTTGAAGATCCAGATGAAGCTTGGCTCGATGGACAGGTTTCTAAAATCACTGGCAAGGATGTTGAAGTCGCCACATCCAATGGAAAGAAGATTACTGCAAAGTTATCAAAGATATATCCCAAGGATATGGAAGCTCCTGCTGGCGGAGTGGATGATATGACCAAGCTCTCGTATTTGCACGAGCCTGGAGTCTTGCAGAACTTGAAAAGTAGATATGAATTGAATGAAATATATACATACACTGGAAACATTCTGATTGCTATAAATCCATTCCAAAGGCTACCTCACATTTACGATGCACACATGATGCAACAATACAAGGGAGCACCGTTTGGTGAATTAAGCCCTCATGTATTTGCCGTTGCTGATGTTGCTTACAGGGCTATGATTAACGAAGGAAAAAGCAATTCAATTCTTGTCAGTGGAGAAAGTGGAGCCGGTAAAACTGAAACTACGAAAATGCTTATGCGATACCTTGCTTATTTAGGAGGAAGGGCTGCCACCGAAGGAAGAACAGTTGAACAGCAAGTTCTTGAATCAAATCCAGTTTTAGAAGCCTTTGGAAATGCTAAAACTGTGAGGAACAACAATTCGAGTCGATTTGGTAAATTCGTTGAGATCCAATTTGATAAGAATGGAAGAATCTCAGGAGCAGCCATTAGAACATACCTTCTAGAAAGATCTAGGGTTTGTCAAGTAAATGATCCTGAACGCAATTACCACTGCTTCTATCTTCTCTGTGCTGCACCGCAGGAGGAAGTTGAGAAATACAAATTAGGACATCCTAAAACATTTCATTACCTTAATCAGTCAAAATGTTATGAACTGGCCGATATAAGCGATGCTCGCGAGTATCTTGCCACTAGAAGAGCTATGGACATTGTTGGAATAAGCCAAAAGGATCAGGAAGCAATTTTCAGAGTAGTTGCTGCTATTCTTCATCTTGGTAACATTGCGTTTACCAAAGGAAAGGAAGCTGATTCATCTGTTCCAAAAGATGATAACGCCAAATTCCACCTGAAAACCACTGCTGAGCTTCTCATGTGTGATCTTGCTGGTTTGGAAGATGCATTAGTGAAGCGTGTGATGATCACCCCAGAGGAAGTTATTAAACGGAGCCTCGATCCGCAAAGCGCAGCAATAAGCAGAGATGGCTTGGCGAAAACAATATATTCTAGACTCTTTGACTGGTTGGTGGACAAGATTAACAATTCGATCGGACAAGACGCGACTTCTAAATGTTTGATTGGAGTCCTTGATATTTATGGCTTTGAAAGCTTTAAAACCAACAGCTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTATTTAAAATGGAACAAGAAGAATATACAAAGGAGGAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGTGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACGTTTTCAAACAAACTGTATCAGACATTTAAGAATCATAAGCGCTTCATTAAGCCAAAATTGTCTCGGACAGATTTCACTATTTCTCATTATGCAGGCGAGGTACAATACCAGTCTGATCAATTTCTAGACAAAAACAAGGATTATGTTGTCCCTGAGTATCAAGATTTGCTGGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGCTTTAAGCTACAACTGCAGTCACTGATGGATACATTAAACTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTGAAGCCTGCAATTTTTGAGAATCAAAACATTATGCAACAACTTCGTTGTGGTGGTGTTTTAGAGGCAATCAGAATTAGTTGCGCGGGCTACCCTACTCGGCGTGCTTTCTTTGAATTTATGCATCGGTTTAGCCTCCTCGCCCCGGAGATCGCAGATTCACACCACGATGAGAAGGTTGTTTGCCAAAAGATTCTAGAAAAAATGGGGCTTGCTGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGGGCAGGTCAGATGGCTGAACTAGATGCTCGTAGGGCTCAAGTACTCAGCAATGCAGCAAAAACTATCCAACGGCGTGTACGAACCTATCAAGCTCGACAACATTATCTTTCATTGCGGACGAAGACGATATTCGTGCAGTCTGTGTGCAGAGCAAACCTTGCATGCAAACTTTATCAGAACATGAGGAGGAAAGCAGCTGCAATAAAAATTCAGAAGCATGCTCGCAGATATGAAGCTAGGAAATCATATAGGAAACTCCACGCATCAGTTCTTACCTTACAAACAGCTTTAAGGGCTGTGGCATCCCTTAAAGAGTTCAAGTTTAGAAAACAGACTAAAGCCTCAATCATTATTCAGGCTCGTTATAGGTGCCACAGAGCTTCTAAATATTACAAGAGGCTTAAGGTAGGAGCAATAGTCGCACAATGCAGATGGAGGGGGAAGATGGCCAGGAGAGAACTCAGGAAACTGAAGATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCAAAGGACAAACTTGAGAAAAGGGTGGAGGAACTCACCTGGCGTCTCCAACTAGAAAAAAGTTTGCGGACCAACCTCGAAGAGTCTAAAGCACAAGAGATATCGAAACTGCAGAATTCATTACAGGAGATGCAGGGTAAACTTGATGAAACCAATGCTCTGCTTGTCAAGGAGCGAGAGAATGTAAAGAAGGTTACCATCGAAGCAACTCCGGTTATCCAAGAAAAGGAGGTTATTGTTGAAGACACTGCAAAGATTGACGCACTAACAGCGGAAGTTGAGAGGCTAAAGACTTCCCTTGAGACGGAAAAACAGAAAGCTGATGAATTTGAAAAGAAATATAATGAAATCCAAGTTTCGAGTGAAGAAAAGACTCACAAATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTCCAAGAATCACTACACAGGCTGGAAGAGAAGATTCATAATTTAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTCTGTCCATGTCTCCTAACAAGTTCCTCTCAGGCCGCTCCAGATCAATTATGCAGAGAGTTGAGAGTGGACATATTGCAGTGGAGTCTAAGCCATCTTTGGAGATGCATAGTCCATCAATGAACCACAGAGAATCCTCTGAAATGGAGGATAAGCCACAGAAGTCATTGAATGAGAAACAGCAAGAGAATCAAGAGTTGCTCATTAGATGCGTTGCACAACATTTAGGCTTTGCTGGAAATAGACCAATTGCAGCCTGTATCATATACAAATGCCTATTGCATTGGAGATCGTTTGAAGTTGAGCGTACCAGTGTTTTCGATCGCATAATCCAAACTATTGGGCATGCAATTGAGACACAGGAGAACAATGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACGCTTCTCTTGTTACTCCAGCGCACCCTTAAAGCGAGTGGTGCAGCTGGAATGGCTCCTCAACGCCGTCGTTCTTCATCAGCAACTCTTTTTGGAAGGATGACACAAAGTTTCCGTGGAGCACCGGGGGGAGTGAACCTTTCCCTCATCAATGGTGGCATGAATGGTGGAGTGGATGCATTAAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATCAGAGATAATTTGAAGAAAGAAATTTCTCCTTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACACCGAAGCCCAGAAAGCCTTGATTGCACATTGGCAAGGGATAGTTAAGAGCCTTGGAAACTTCTTAAATACTCTAAAAGCAAATCATGTTCCTCCATTCTTGGTTCGTAAGGTGTTCACCCAAATTTTTTCATTCATTAACGTCCAACTTTTCAACAGTCTTCTCTTAAGACGAGAGTGCTGCTCATTTAGCAACGGAGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAAGCAACAGATGAGTATGCAGGCTCAGCTTGGGATGAACTCAAACATATAAGACAGGCTATAGGATTTCTGGTCATACATCAAAAACCAAAGAAAACGCTGGATGAAATAAGTCATGACCTATGTCCTGTACTTAGTATACAACAGTTATATCGAATAAGTACTATGTACTGGGATGACAAGTATGGCACACACAGTGTGTCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCCGTTAGTAATTCATTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCAAAGTCGATGGAACAGATGGATATATCTGATATAGAGCCCCCACCATTAATCCGTGAGAATTCTGGCTTTAGCTTCTTGTTGCCACGCGCAGACTGA 4596 0.416 MMQGTPVNIIVGSHVWVEDPDEAWLDGQVSKITGKDVEVATSNGKKITAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEVEKYKLGHPKTFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFTKGKEADSSVPKDDNAKFHLKTTAELLMCDLAGLEDALVKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDATSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVQYQSDQFLDKNKDYVVPEYQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENQNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFMHRFSLLAPEIADSHHDEKVVCQKILEKMGLAGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKTIQRRVRTYQARQHYLSLRTKTIFVQSVCRANLACKLYQNMRRKAAAIKIQKHARRYEARKSYRKLHASVLTLQTALRAVASLKEFKFRKQTKASIIIQARYRCHRASKYYKRLKVGAIVAQCRWRGKMARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEISKLQNSLQEMQGKLDETNALLVKERENVKKVTIEATPVIQEKEVIVEDTAKIDALTAEVERLKTSLETEKQKADEFEKKYNEIQVSSEEKTHKLEDTEKKVRQLQESLHRLEEKIHNLESENQVLRQQALSMSPNKFLSGRSRSIMQRVESGHIAVESKPSLEMHSPSMNHRESSEMEDKPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQENNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPGGVNLSLINGGMNGGVDALRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQMDISDIEPPPLIRENSGFSFLLPRAD 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01077 1531 SMART DIL_2 1349 1456 IPR002710 -
Aip06g01077 1531 CDD MyosinXI_CBD 1112 1497 IPR037975 GO:0007015
Aip06g01077 1531 ProSiteProfiles Dilute domain profile. 1161 1474 IPR002710 -
Aip06g01077 1531 PANTHER MYOSIN 7 1528 - -
Aip06g01077 1531 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Aip06g01077 1531 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 Coils Coil 918 952 - -
Aip06g01077 1531 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Aip06g01077 1531 CDD MYSc_Myo11 78 722 IPR036018 -
Aip06g01077 1531 Gene3D - 669 735 - -
Aip06g01077 1531 SMART iq_5 736 758 IPR000048 GO:0005515
Aip06g01077 1531 SMART iq_5 832 854 IPR000048 GO:0005515
Aip06g01077 1531 SMART iq_5 807 829 IPR000048 GO:0005515
Aip06g01077 1531 SMART iq_5 855 877 IPR000048 GO:0005515
Aip06g01077 1531 SMART iq_5 784 806 IPR000048 GO:0005515
Aip06g01077 1531 PANTHER MYOSIN-9 7 1528 - -
Aip06g01077 1531 Pfam Myosin N-terminal SH3-like domain 11 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Aip06g01077 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 885 IPR027417 -
Aip06g01077 1531 Gene3D - 441 625 - -
Aip06g01077 1531 Pfam DIL domain 1350 1453 IPR002710 -
Aip06g01077 1531 Pfam IQ calmodulin-binding motif 860 877 IPR000048 GO:0005515
Aip06g01077 1531 Pfam IQ calmodulin-binding motif 834 854 IPR000048 GO:0005515
Aip06g01077 1531 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Aip06g01077 1531 Pfam IQ calmodulin-binding motif 787 806 IPR000048 GO:0005515
Aip06g01077 1531 SMART MYSc_2a 59 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 Gene3D Kinesin motor domain 67 664 IPR036961 -
Aip06g01077 1531 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 787 IPR027417 -
Aip06g01077 1531 Coils Coil 970 1053 - -
Aip06g01077 1531 MobiDBLite consensus disorder prediction 1094 1112 - -
Aip06g01077 1531 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 ProSiteProfiles IQ motif profile. 833 857 IPR000048 GO:0005515
Aip06g01077 1531 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Aip06g01077 1531 Gene3D - 736 786 - -
Aip06g01077 1531 Gene3D - 787 834 - -
Aip06g01077 1531 Gene3D - 835 884 - -
Aip06g01077 1531 MobiDBLite consensus disorder prediction 1080 1113 - -
Aip06g01077 1531 Coils Coil 879 913 - -
Aip06g01077 1531 Gene3D - 254 312 - -
Aip06g01077 1531 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip06g01077 1531 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01077 Aip-Chr6 15826888 15835485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01077 4 1531 Myosins gene family AT1G54560 82.995 0.0 2687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01077 K10357 - gmx:100816792 2684.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01077 06 15826888 15835485 Aip06g01077 06 15826888 15835485 ECH