Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01067 ATGCCTAGAAGGTATATCACAAGATCACAAGGCTGGAGAAAACAAGCAAGCAAGGAGCCAGTTCACTTGAATGTTGATAGCTCATCTGATTCTTATGAGTCTGCAGAGGACAGTTTATGCAAGCCACACATGCCACTTGACTCTCTGGACTCAAGCAGTGACAACAATGATGATGTTGGTCCTAGCAGCGATAGGAGAAAAAGGAAGACTGCCAGTGACAATGACAAAGGCAAGAAAAAGGTTGTTAATGATGAAGATACTTCTCGTCCCCCATCAATGGATGCATATGATTATGAGAAGGAGGTAGATGATGATGAGAATGAAGAAAACTTGCAATTGTCTTTCTCTGATGATAGCTGGAAATCTGATGAACTGAAGACTCCACCagactctgaagatgaagcagacccagctgcgaatctcatcttcaatgatactgccaagtttggacatgtgagattagagctagAATACCTCCATTGCTTACCACCTGTAAGGAGCAAACCCCGTGGCAGGCCATCACATTATGCAAGAAAAAAAGATGCACATGAGGCACCTGTTCAGGGGAGCCAAGAGCGCACAGCAACAAAATTGAAGAGAAAATATGACAAATTCACATGCGGGACATGTGGAGATGTTGGTCACACAACAAGGAGTTGTAGAATAGCAAAGAAACAAAAGGCTGATGAGCTAGCAGCTACTGCAAAGGCTGCTGAAGATGCTGCAAATAAGGGTGACACTGGTTCTAAAGGTAACAAAGGTGAGGTTGTTACTGAAGAATGTGAGCCAGCAGCCCCTCTCTCTCTCTCTCAGCCACCACCAGCAGCAGCCACCGCCGTTGCCGAACTCTTCTCGTCAGCCAGAGGGTGCCTCGCAGCCGGCATTGACGACAGAGGGTCAGCTCGAAGCTCTTGGCCGTCGATCCTCTTCTCCTCCTCCTCGTCGCCTTTGGCCTTGTCTTCAGAACTTGAAGGACTTCTCGTTTCTCACCCTCAAATATTAGATGCTGTTGTCATCCCATATCTAGATGATGAGGCTGGTGTGATTCCAATTGCCCTTGTTGTTCGTTCACCCAACACTTCACTCACTGAACAAAATGTTCAGAAGTTTATTGCTAATCAGGTTTAG 1128 0.4282 MPRRYITRSQGWRKQASKEPVHLNVDSSSDSYESAEDSLCKPHMPLDSLDSSSDNNDDVGPSSDRRKRKTASDNDKGKKKVVNDEDTSRPPSMDAYDYEKEVDDDENEENLQLSFSDDSWKSDELKTPPDSEDEADPAANLIFNDTAKFGHVRLELEYLHCLPPVRSKPRGRPSHYARKKDAHEAPVQGSQERTATKLKRKYDKFTCGTCGDVGHTTRSCRIAKKQKADELAATAKAAEDAANKGDTGSKGNKGEVVTEECEPAAPLSLSQPPPAAATAVAELFSSARGCLAAGIDDRGSARSSWPSILFSSSSSPLALSSELEGLLVSHPQILDAVVIPYLDDEAGVIPIALVVRSPNTSLTEQNVQKFIANQV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01067 375 MobiDBLite consensus disorder prediction 1 136 - -
Aip06g01067 375 MobiDBLite consensus disorder prediction 119 133 - -
Aip06g01067 375 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 321 375 - -
Aip06g01067 375 SUPERFAMILY Retrovirus zinc finger-like domains 191 228 IPR036875 GO:0003676|GO:0008270
Aip06g01067 375 MobiDBLite consensus disorder prediction 21 35 - -
Aip06g01067 375 Gene3D - 319 375 IPR045851 -
Aip06g01067 375 MobiDBLite consensus disorder prediction 164 195 - -
Aip06g01067 375 MobiDBLite consensus disorder prediction 98 112 - -
Aip06g01067 375 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 321 375 - -
Aip06g01067 375 SUPERFAMILY Acetyl-CoA synthetase-like 321 374 - -
Aip06g01067 375 MobiDBLite consensus disorder prediction 59 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01067 Aip-Chr6 15630304 15644640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01067 321 375 Monolignol Biosynthesis Gene Families AT4G05160 76.364 2.73e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01067 K01904 - ahf:112769454 261.922