Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01065 ATGGTTATGGCGAAGGTGAAGAGGCAGAAGCTGCAAGCATGCATCACGTGCCCACTCTGCCACAAACTCCTCCGAGACGCCACCACCATCTCCCTCTGCCTTCACACTTTTTGCAGGAAGTGCATATATAAGAAGCTTTCAGATGACGAGATGGATTGTTGTCCAGTATGTTATGTTGATCTCGGATGCCTTCCACTCCAAAAACTCAGGCCAGACCACAATTTGCAAGATATTAGGGCCAAAATATTCCCTTTTAGGCGAAGAAAAATCGATGCTCCCCAAGTTGTTCCTTCAATAACCTTGCCTGCAAAGAGGAAGGAAAGATCACTTTCATCATTGGTGGTTAATGCTCCCAAGGTTTCAAATCAGACTGGCTTCACAGGCAAGAGAACAAAATCTGGCACAAGAAAGGCAGCTGAAGAAACATATGGTGAACATAATCTGGGTTCTTTTGTAGCTGATCCTTCTAAGAAGAGGCCCAATGAAGATACAGAAAACAGTATGGAACTTGCAGAAGGGAAGGGTGATCTCTGGACGCCCTTGAACTGTCTCGTTGAAGCTGCCAATCGAACAAAGTCCTCCAAATCAAACTCACAAGGGACTCCTCATGCCAAGTTAGAGTCTCCATCAACTGCTTATGGTGGACTAGACATGGTTGCAACCACAACCAAATCAGACCTACCTACTTCATTGAAGAGTGCATTTCACATGGTTAAAACTAAAATCAAGGATAATAGACATAAAAGGTTCGGAGCTGACAAGGAGGGACACACCCTGCATTCAGGATCTGCAGTGAAGCAAAAAAGGCCGCTGCGTCCTGTTCAGGAAAGAGCAGAAGCATCTGAGACATCTGCCTCAGATACAACAGGGAGCAGGTGTGATGGGAAAAACAGTCCTATTTGGTTTTCCTTAGTTGCTTCGGAAGACCAGAAGGGAGATGTTCCTTTGCCACAGATTTCAGCATGTTATTTAAGAATAAAGGATGGTACTGTGCCTGTCTCATTTATACAAAAGTATCTTGTGAAGAAACTTAATCTAACAAATGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAGCCTGTGTTGCCAAATTTGCAGCTGCATAACTTAGTAGACTTGTGGTTCTGCTCAGGGTCAACTACAAAGAAGATGCCGGCATCTGTGGGCTCCTCGGCTAAGGACTTTGTCATGGTTTTATCATATTGTCGAAAGGTCGTACCTCATTGA 1227 0.4466 MVMAKVKRQKLQACITCPLCHKLLRDATTISLCLHTFCRKCIYKKLSDDEMDCCPVCYVDLGCLPLQKLRPDHNLQDIRAKIFPFRRRKIDAPQVVPSITLPAKRKERSLSSLVVNAPKVSNQTGFTGKRTKSGTRKAAEETYGEHNLGSFVADPSKKRPNEDTENSMELAEGKGDLWTPLNCLVEAANRTKSSKSNSQGTPHAKLESPSTAYGGLDMVATTTKSDLPTSLKSAFHMVKTKIKDNRHKRFGADKEGHTLHSGSAVKQKRPLRPVQERAEASETSASDTTGSRCDGKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLTNEAEVEIMCRGQPVLPNLQLHNLVDLWFCSGSTTKKMPASVGSSAKDFVMVLSYCRKVVPH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01065 408 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 112 IPR013083 -
Aip06g01065 408 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 151 406 IPR044807 GO:0004842
Aip06g01065 408 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 3 140 IPR044807 GO:0004842
Aip06g01065 408 MobiDBLite consensus disorder prediction 190 211 - -
Aip06g01065 408 MobiDBLite consensus disorder prediction 190 206 - -
Aip06g01065 408 ProSiteProfiles Zinc finger RING-type profile. 17 57 IPR001841 -
Aip06g01065 408 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 3 140 - -
Aip06g01065 408 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 151 406 - -
Aip06g01065 408 MobiDBLite consensus disorder prediction 251 292 - -
Aip06g01065 408 Pfam Zinc finger, C3HC4 type (RING finger) 17 57 - -
Aip06g01065 408 Gene3D - 281 385 - -
Aip06g01065 408 MobiDBLite consensus disorder prediction 124 166 - -
Aip06g01065 408 ProSitePatterns Zinc finger RING-type signature. 33 42 IPR017907 -
Aip06g01065 408 SMART ring_2 17 57 IPR001841 -
Aip06g01065 408 SUPERFAMILY RING/U-box 11 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01065 Aip-Chr6 15620811 15624054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01065 2 327 C3H Transcription Factor Family AT2G30580 41.389 7.50e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01065 K16277 - gmx:100783999 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01065 06 15620811 15624054 Aip09g02018 09 76117060 76122325 ECH
Aip06g01065 06 15620811 15624054 Aip06g01065 06 15620811 15624054 ECH