Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01056 ATGGGAGACGAGACGAGTCCTGAGTGGATGAACAAGGGAGACAATGCATGGCAGCTGATGGCGGCAACAATGGTGGGGATGCAAACAATTCCAGGGCTAGTAATCTTGTACGGAAGCATGGTGAGCAGGTCATGGGCCATCAACTCGGCCTTCATGGCCTTATACGCTTTCTCCGCCGTGTTCGTTTGTTGGGCCAGCTGGGCTTACCGCATGTCGTTCGGCGAAGAATGGGTGTTTTTCTTGGGCAAGCCGGCGGTGGCGTTGGACGAGAAATTCCTTCTAGGGAAGTCGTTTCTGGGAGCGTTCCCTACTGCAACGATGGTGTTCTTTCAAGGAGTATTTGCGGCCATTACTCTGGTTCTTATTGGCGGTTCATTGCTTGGAAGAATGAACTTCCGTGCATGGATGCTGTTTGTTCCTCTCTGGCTTACATTTTCATACACGATCACTGCTTTCAGTATTTGGAGCCCGAATGGGTGGTTATTTAAGCTTGGAGTTATTGACTTTGCTGGTGGCCTTGTTATTCATGTCTCTGCTGGTGTTGCTGGCATTACCGCAGCTTTTTGGGTGGGTCCAAGATCAGAGAAGGAAAGAGAAGCATTTGCTTCAAATAATATGATTGTAGCATTGGGAGGTGCGGGCTTGGTTTGGATGGGGTGGTCAGGCTTCAACGGCGGTGCTCCGCTTGCTGTGAACACACTTGCATCTCTCGCAATTCTAAACACTCATGTCTGCGCTGCTACTAGCATCATCACATGGCTCGTCCTCGACACTTTATGTTTCGGTAAGCCAACCATGTTTGGCGCCATTCAAGGCTTGATCACCGGCCTTGTTTGCATTACACCCGCCGCAGGAATAGTGCAAGGTTGGGCAGCAATTTTGATGGGTTTGTTCTCAGGAAGTGTACCCTGGTACACATTGATGGTGCTTCACAAGAAGTTCGAATTCTTAAACAAAATAGATGATCCAATGGCCATTTTTCACACACATGCCATAACCGGAATTCTTGGTGGAATTCTAACAGGCTTATTTGCTGTTCCTAAATTGTGTCGCCTCTTCTATGGAGTGCCTGATTGGAAGAAATACACTGGACTCTTTTATGGCCTTAAAAATGGTTTAGCCCATGCTGGTTTGACTCAGTTGGGGATCCAACTTGAAGCCACTATTTTTGTAGTTGTATTTAATGTTATTAGTACAACCGTGATATGCTTGGTTGTGAGGAGCATAGTGCCATTAAGGGTTGATGATGAGGATGCATTGCAAGTAGGTGGTGACAAAAGCATGCATGGAGAAGAGGCATTTGCCTTGTGGTGTTCCCATCAGGATAAGGATACCAAGTTTGAGAATGTAAAGCAAAACAAAGTTTATGACACAAAAGATTTTTCGTCCTCCATTGACGAATCATCAACCAAGAAGGCTTCTAGTGAAGTTCAAATGGTTTGA 1443 0.4636 MGDETSPEWMNKGDNAWQLMAATMVGMQTIPGLVILYGSMVSRSWAINSAFMALYAFSAVFVCWASWAYRMSFGEEWVFFLGKPAVALDEKFLLGKSFLGAFPTATMVFFQGVFAAITLVLIGGSLLGRMNFRAWMLFVPLWLTFSYTITAFSIWSPNGWLFKLGVIDFAGGLVIHVSAGVAGITAAFWVGPRSEKEREAFASNNMIVALGGAGLVWMGWSGFNGGAPLAVNTLASLAILNTHVCAATSIITWLVLDTLCFGKPTMFGAIQGLITGLVCITPAAGIVQGWAAILMGLFSGSVPWYTLMVLHKKFEFLNKIDDPMAIFHTHAITGILGGILTGLFAVPKLCRLFYGVPDWKKYTGLFYGLKNGLAHAGLTQLGIQLEATIFVVVFNVISTTVICLVVRSIVPLRVDDEDALQVGGDKSMHGEEAFALWCSHQDKDTKFENVKQNKVYDTKDFSSSIDESSTKKASSEVQMV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01056 480 Gene3D Ammonium transporter AmtB like domains 2 454 IPR029020 -
Aip06g01056 480 Pfam Ammonium Transporter Family 17 434 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip06g01056 480 TIGRFAM amt: ammonium transporter 14 433 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip06g01056 480 PANTHER AMMONIUM TRANSPORTER 2 479 - -
Aip06g01056 480 SUPERFAMILY Ammonium transporter 9 414 - -
Aip06g01056 480 PANTHER AMMONIUM TRANSPORTER MEP2 2 479 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip06g01056 480 PRINTS Rhesus blood group protein signature 111 127 IPR002229 GO:0005887
Aip06g01056 480 PRINTS Rhesus blood group protein signature 207 225 IPR002229 GO:0005887
Aip06g01056 480 PRINTS Rhesus blood group protein signature 238 260 IPR002229 GO:0005887
Aip06g01056 480 PRINTS Rhesus blood group protein signature 331 347 IPR002229 GO:0005887
Aip06g01056 480 ProSitePatterns Ammonium transporters signature. 168 193 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01056 Aip-Chr6 15373711 15376206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01056 105 452 Inorganic Solute Cotransporters AT2G38290 53.161 1.07e-122 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01056 K03320 - gmx:100782944 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01056 06 15373711 15376206 Aip06g01056 06 15373711 15376206 ECH