Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01050 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCCAAGCCCGCCAAATCTGGTGGTGGCAAGCAAAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCGCTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGTTCGATTAGACTGGTCTCCGCCCACGCAAGTCAGCAGATTTACACAAGAGCAACAAACACCTAG 327 0.4771 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01050 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Aip06g01050 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Aip06g01050 108 MobiDBLite consensus disorder prediction 1 38 - -
Aip06g01050 108 Gene3D - 21 108 - -
Aip06g01050 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01050 Aip-Chr6 15229850 15231608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01050 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 2.55e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01050 K02975 - gmx:100786842 157.532