Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01049 ATGTGCATCAAGTGGAAGGTATCTGGGTGGCGCCGTTGGTTCTCCTGGGAGCGTTTTATGGCCGCCATCAGGGAGTTCGACACCAGATGTCCGTCGTCGTCGGCGGTGGAGGAGGTGCGGTTAAGATTCTGCATGGAGGTCGGACCTGCTCCAAAGAAGGATAAGGCTCCTCTACCATCTTCTAAACCTGCTAAATCTGGTGGTGGCAAGCAGAAGAAGAACTGGAGTAAGGGAAAACAAAAGGAGAAGGTGAACAACCAGGTATTGTTTGATCAAAGTACTTATGCCAAGCTCCTCTTTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCTATTCTCTCTAATCATTTGAAGGTACCTCTATTTCTCTTACTCTTTCAATATGTTGTCTTGATGATGAAAGGGATGGAGGCAGACATCAAGCGACTCTTTCAATTGCTTGAGTTGGTAATGGAGGAACACCGAGTTGAGAGGGCCAGAACTTCTGAGGCTACGAATATGAAGTTTGACGTGATTCAACACTCTATTGCCAGCTCGCTTAGCCCAGAACTCGTAGCCATTTTCCATTGCGTGAGCCTATGCATGGGTCGAACTCTGAGGGTGATCTCCAACCCTGATACGATCATCCTTAACGAAGGCTGA 642 0.4766 MCIKWKVSGWRRWFSWERFMAAIREFDTRCPSSSAVEEVRLRFCMEVGPAPKKDKAPLPSSKPAKSGGGKQKKNWSKGKQKEKVNNQVLFDQSTYAKLLFEAPKFKLITPSILSNHLKVPLFLLLFQYVVLMMKGMEADIKRLFQLLELVMEEHRVERARTSEATNMKFDVIQHSIASSLSPELVAIFHCVSLCMGRTLRVISNPDTIILNEG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01049 213 Pfam S25 ribosomal protein 59 120 IPR004977 -
Aip06g01049 213 PANTHER 40S RIBOSOMAL PROTEIN S25 32 121 IPR004977 -
Aip06g01049 213 Gene3D - 69 123 - -
Aip06g01049 213 PANTHER BNAA04G12260D PROTEIN 32 121 - -
Aip06g01049 213 MobiDBLite consensus disorder prediction 52 80 - -
Aip06g01049 213 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01049 Aip-Chr6 15213842 15218716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01049 50 136 Cytoplasmic Ribosomal Protein Gene Family AT4G39200 72.414 6.15e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01049 K02975 - gmx:548053 101.293