Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01022 ATGTCTTCATCATCATCAAAATCTCCCTCTCCCCTGATTACAGTGAAAAGGTGCAAACCAGAGCTAGTAGCTCCGGCTATGCCCACTCCCCGCGAACTTAAACTGCTATCAGACATTGATGATCAAGAAGGGTTTCGTTTCCAACTTCCAAGCATATTTATATACGGTCACAATCCATCAATGGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCATTTGCCGGTAGGCTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACTGCAGAGGGTGTCTTGTTCATCGAGGCTGATGCTGACGTGGCACTTGACCAACTTGGTGACTCCCTTCAACCTCCGTTCCCTTGTTTTGAAGAACTCCTTTACAATGTTCCAGGATCGGAAGGAATTGTCAACTGTCCCCTTCTACTCATACAGGTGACACGCTTTAAGTGCGGCGGTTTCGTTTTTGCCATACGCGTGAATCACACGATGGTGGATGCAACTGGTCTAGTACAATTTGTGAGTGCTTTAACCGAAATGGCTCAAGGTGCTCATCAACCTTCCATTCTGCCTGTATGGCAAAGGGAGCTCCTACTTGCAAGAAACCCACCACAAATCACATGCAACCATCGCGAATATGAGCAAGTTCCAAATACCAAAGAAGGGACCATCATTTCTTACGAGAACGGTATGGTTCAACGCTCCTTCTTCTTTGGACCAACTGAAATAGCTTCCCTTCGTCGTTTGGTTCCACGTCACCTTGGCCAATGCACTCGATTTGAGCTTATAACTGCATGCTTATGGCGTTGCCGTACAAAAGCATTGCAACTTGCGTCAGAAGATGATGTTCGCATGATGTGCATCGTGAATGCACGCGCTAGGTTTAACCCTATTATACCCCTTGGTTATTACGGAAACGCTTTTGTTTATCCGGCAGCAGTTGCCAGTGTAAGGAAGCTTTGTGAAAATCCGTTTGGTTATGCCGTAGAGTTAATAAAGAAAGTAAAAGCTGAGGTGACAGAAGAGTACGTGCGTTCAGTGGCAGATCTAATGGTTACAAAAGGACGACCCTTATTTACAACCGTAGGATCTTGTATCGTGTCAAACTTGACACGTTTTGGGTTAAGAGAAGCGGATTTTGGATGGGGCAAAGCATTATATGCTGGTGTGTCTCAAGGTGGAGCTGGGCCGGCTTTTCATGGAGCAACCTATTTTATGGATTATGAGAATGAAAAAGGAGAAGAAGGTGTATTATTTCCAATTTACTTGCCTTCCAACGCTATGGAGAGATTTGAGAAAGAGTTGGGTGATTTGCTTGGTGGAGACTTTAATAATAATCAGCCTACAAAGAGTGATGAAACTCCTATGTTTATGAGGTCTACCTTGTAG 1410 0.4475 MSSSSSKSPSPLITVKRCKPELVAPAMPTPRELKLLSDIDDQEGFRFQLPSIFIYGHNPSMEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFIEADADVALDQLGDSLQPPFPCFEELLYNVPGSEGIVNCPLLLIQVTRFKCGGFVFAIRVNHTMVDATGLVQFVSALTEMAQGAHQPSILPVWQRELLLARNPPQITCNHREYEQVPNTKEGTIISYENGMVQRSFFFGPTEIASLRRLVPRHLGQCTRFELITACLWRCRTKALQLASEDDVRMMCIVNARARFNPIIPLGYYGNAFVYPAAVASVRKLCENPFGYAVELIKKVKAEVTEEYVRSVADLMVTKGRPLFTTVGSCIVSNLTRFGLREADFGWGKALYAGVSQGGAGPAFHGATYFMDYENEKGEEGVLFPIYLPSNAMERFEKELGDLLGGDFNNNQPTKSDETPMFMRSTL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01022 469 Gene3D - 222 442 IPR023213 -
Aip06g01022 469 PANTHER ALCOHOL ACYLTRANSFERASE 13 448 - -
Aip06g01022 469 Gene3D - 14 221 IPR023213 -
Aip06g01022 469 MobiDBLite consensus disorder prediction 450 469 - -
Aip06g01022 469 Pfam Transferase family 15 442 - -
Aip06g01022 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01022 Aip-Chr6 14685717 14746786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01022 22 442 Monolignol Biosynthesis Gene Families AT5G48930 29.263 1.25e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01022 K19861 - gmx:100787907 659.062