Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01015 ATGTCGAATTTGGATCTCTCAAAAATTTCTCTGCGGCCATTCAAGCTAAGCGATGTTGACGACTTTTTGCTATGGGCTGGGGATGATCAAGTCACACAAAACTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCGTGGCGACGCTCAATCTGCCTTGACGACCGTTCCATAGGCTTTGTTTCGGTGTATCCGTGGTCAGGTGATGATAGATGCAAGGCTGACATAGGCTATGCCGTGGCCGCAGACTACTGGGGCCAAGGCATAGCCACCAAAGCAGTGAAGATGGCTGTGCCTCAAGTGTTCAATGACTTGTCTCATCTGGTAAGATTGCAGGCTTTCACTTCCCCTGAGAACAAGGCTTCTCAGAGAGTACTGGAAAAGGCTGGGTTCCTTAAGGAGGGTCTGCTCAGAAAGTACACTTATTTTAAAGGGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTCGTGGAAATAA 543 0.4659 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPENKASQRVLEKAGFLKEGLLRKYTYFKGNIKDSVVFSFLSTDEFPHDDSWK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01015 180 Pfam Acetyltransferase (GNAT) domain 9 143 IPR000182 GO:0016407
Aip06g01015 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Aip06g01015 180 CDD NAT_SF 63 110 - -
Aip06g01015 180 Gene3D - 2 176 - -
Aip06g01015 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 174 - -
Aip06g01015 180 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 5 174 - -
Aip06g01015 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 160 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01015 Aip-Chr6 14623017 14623666 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip06g01015 Acetyltransf_3 1.8e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01015 - - gmx:100527210 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01015 06 14623017 14623666 Aip06g01015 06 14623017 14623666 ECH