Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01009 ATGGGGTGTGTGATTAGCAGGGAGGTGTCTTCTGGAATAATCGCAGAGGTGAAAGAGGAGAAGAGTTTCGGTGCTGATTCTAAGAGCAATAATAAGGTTGATGGAGTCGCGGAAGAGGCTCAGAATCAGAATCGGAATCACAATGGTGGTAACCACAGGGAAGAGAAGAGTGGCAGCGAAGTTCAGAAGCCGAGGGGAGAAAGGAGAAGATCGAAGAAACCGAATCCGCGGCTAAGCAATCCTCCCAAGCATTTAAGGGGTGAGCAGGTTGCGGCTGGCTGGCCACCCTGGCTCACCGCCGTGTGCGGCGAAGCGCTTAACGGCTGGATTCCCCGAAAGGCTGACACATTTGAGAAGATTGATAAGATCGGGCAAGGAACATATAGTAATGTGTACAAAGCTAAAGACATGATGACAGGCAAAATTGTTGCTCTAAAGAAGGTTCGATTTGATAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTGCGGAGGTTGGATCATCCAAATGTTGTAAAGTTGCAAGGCTTAGTTACATCAAGGATGTCCTGCAGTCTGTATTTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGTTGCGAGCCCACGAATCAGGTTCACGGAACCTCAGGTTAGACAAGGATCAAATCTTCTCATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTGTTCGATCCAAACCATAAGCATCCCATGACTAGTCGAGTAGTAACTCTTTGGTACCGGCCCCCAGAATTGCTTCTTGGTGCCACCGATTATGGTGTGGGTATAGACCTATGGAGCGCCGGATGCATTTTAGGAGAGTTATTGGCTGGAAAGCCAATTATGCCGGGTCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAATATTGGAAGAAGTCGAAGTTGCCTAACGCCACCTTGTTTAAGCCTCGAGAGCCATACAAGAGATGCCTAAGAGAGACATTTAAAGATTTTCCACCTTCTGCACTACCCCTTATCGAAAGTCTTCTGGCATTTGATCCTGCCGAACGGAAAACTGCCTCAGATGCTTTGCGAAGTGAGTTCTTCACCACAGAGCCATATGCTTGTGATCCTTCAAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCTAGACGGCAGGACGAAGAGGCCAGAAGAATAAGGGCTGCAAGCAAAGCTCAGGCTAATGGTCCAAGGAAGCATCGCATGCGTGATCGTGCCGTGAAAGCTATTCCTGCTCCTGAAGCCAATGCTGAGATTCAATCCAACATTGATAGAAGGCGTCTAATAACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCACCGCCACATCAAGATGGACAACTTGGATTTCCATTGGGATCTTCCCATCGTATTGATCCAGATACTGTTCCTATTGATGTCTCCTTCACTTCAACAACGTCGTATATTTATTCAAAGGAACCATTCCAAGCGTGGTCAGGTCCCATAGGTAATGCTGCTGCTGAAATTGGAGTGCCAAAAAACAAGAGACACACCGCAACTGATGCATTGGATTTATCAAAACCACATAAAGCTATTGCCACTGCCCTTGATTGGTCCTCCACTCCCGACGCTCGCAAAGCCGCCGTCTCTTTTCTCGATTCTATCAAGGCTGGTGATATTCGGATATTGGCAAACACGTCGTTCCTTTTGGTAAAAAGGAACTGGTCCTCTGAAATCCGTTTACACGCTTTTAAAATGCTGCAGCATTTGGTGCGATTAAGGTGGGACGAACTAAGCTCCGCAGAGCACAAGAACTTTGCAAATCTCTCCATTGATTTAATGTCTGAGACTGCTGATCCCTGTGAAGATTGGGCTCTTAAAAGCCAGACGGCTGCCCTCGTTGCTGAGATAATTAGAAGAGAGGGGCTTAATCTATGGAAGGAAATGTTTCCATCATTGGTTTCTCTATCCAGCAAGGGTCCAATACAAGCTGAATTAGTTTCAATGATTCTTCGTTGGCTTCCTGAAGATATTACAGTTCATAATGAAGACTTAGAAGGTGATCGCCGAAGGCTACTCTTGCGTGGGCTAACTGAATCACTGCCTGAAATTTTGCCTCTCCTATACACTTTACTGGAAACACACTTTGCAGCTGCACTAAATGAAGCTGGTAGAAACCAGATGGAAATTGCCAAACTGCATGCTGCTACTGTAACAGCTACACTAAATGCAATAAATGCATATGCTGAGTGGGCTCCATTGTCCGATCTTGCCGATGCTGGCATCATTAATGGATGTGGTTTCCTACTATCTGCTCCTGATTTTCGACTTCATGCTTGTGAGTTTTTCAAACTTGTCTCCCCAAGGAAGAGGCCCATCGATGCTTCTGCTTCTAAATTTGACCAAGCTATAATTACTATCTTTCAAATCTTGATGAACATATCTAGAGAGTTTTTGTACAGATCTGGCTCAAATCCAGGATCTATAGATGAGGGTGAATATGAATTCGTGGAATTTATATGTGAAAATATGGTGTCACTAGGCGCTTCTAACTTGCAAAGTATTGCTGGAGATAGCAGCATACTTCCTTTCTATCTTGAACAGATGCTGGGGTTTTTCCGACATTTCAAGTTTGCCATTCATTTCCAATCCGTGCACTTCTGGCTGGTGCTAATGAGGGATTTAATGTCAAAACCAAAAAGTTCCTCGCATTCAGCCGTTAGTAGTTCAGGTTCTGGAGATGCTGAAAATGTAAAGAAAAAGATTCTAAGCTTTGTGAATGATGATTTCTGTGGTGCAATTTTGGAAACATCTTTCCCTCACATGCTCAAGAGAGAGAAAATCCTACCCGATACTGCACTGTCTTTAGGGGTGTTGGAGTTGTGGAGTGATGACTTTGAGGGGAAGGGTGAATTCAGCCAATATCGCTCTAGGCTGTTGGAGTTGATTAGGTTCGTTTCCTCTTGCAAACCCTTGGTGGCAGCTGCTAAAGTTTCCGAAAAAATTGATGCAATCATCAAGAGTCTCTTGGTTTCACCAACTCAAACTCAGGACTTAGCATTGATGGAAAGCATGCAGTTGATTTTAGAGAATATTGTGAGTACAGTTTTTGATGAATCCAATGATTTTGCCAAGGCAAATGCTGAAATGCAGTTTGCATTACGAAGAACATTTGACGGTTTACTTCAGCAATTTCTTTCATTGAAATGGACGGAACCCGCACTTGTGGAAGTACTTGGTCACTATTTGGATGCAATGGGCCCTTTCTTGAAGTATTCCTCAGATGCAGTTGGCAGTGTTATCAATAAACTTTTTGAACTCCTCACATCCCTTCCCATTGCAGTCAAGGATACTTCGACTTCTAGTGCACGGCGTGCAAGGTTGCAGATTTGTACATCATTTATTCGGATAGCCAAAACAGCTGATAAAAGTATCCTGCCTCATATGAAGGGCATTGCCAATACCATTGGATGTTTGCAAAGGGAAGGTTGTTTGCTTCGAGGAGAGCATAATCTTCTAGGTGAAGCTTTTCTTGTGATGGCTTCTGTTGCTGGGATTCAACAGCAGCAAGAAGTTTTAGCATGGTTATTGGAACCTTTGAGCCAAGAGTGGACACATTCGGAATGGCAGGATAAGTATTTATCTGAACCATATGGCCTGGTTTACTTGTTCTCAGAAGCACAAGTTATGTGGTCAAGTTTTCACAGTGTGACATTCTTTGAGAAGGCACTTAAGAGGAGTGGAATCAAGAAAGCTAATTGGAATCCTGAAAACAGCTCAACACCGGATTCAACTCCTATAAATCCAATATCCCCCCATGTGTCATGGATGCTGACTCCTCTGTTGAAACTACTTCGCACTATACATTCCCTTTGGTCTCCATCTGTACGTCAAACTTTACCTGGAGAGATCCAAGCTGCAATGATCATGAGTGATGTTGAAAGGTTCACTCTTCTTGGAGAAGGGAACCCCAAGGTTCCAAAGGGTTCGTTGGCTAATGTTGACAAGAGTAAGGAAGGATATGCTGAACCTAATGAATCAGATATACGAAATTGGCTAAAAGGAATCAGAGACAGCGGATATAATGTATTGGGTTTGTCCACAACAATTGGGGATTCCTTTTTCAAAACTTTGGATGTGCATTCTGTTGCGTTTGCACTAATGGAGAACATACAGTCGATGGAGTTCAGGCATATAAGGCAGCTTGTTCATTCCGTTTTGATACCTTTGGTTAAGCATTGCCCTTTGAATATGTGGGAGACTTGGCTAGAAAAGCTTCTGCACCCATTATTTGTCCATGCTCAGCAGGCGCTCAGCTGTTCATGGTCATGTCTTCTACAAGACGGTAGAGCAAAGGTTCCAGATGTTATTGAAATTATTAGTGGATCAGACCTAAAAGTGGAGGTGATGGAGGAAAAGCTTCTGAGAGATCTCACACGAGAGATATGTTCACTTCTCTCTGTAATTGCTTCTCCTCCCCTTAATCCTGGAATCCCTTCTTTGGAACAGTCTGGGCACGTTAGTCGATTAGACACGTCTTCACTGAAAAGCTTGGACACATTTGCATCAAGCTCTATGGTTGGTTTCCTTCTGAAGCATGGTTTGGCTCTTCCAACGCTACGCATGTGTTTAGAGGCTTTTACATGGACGGATGGTGAAGCTGTGACAAAGATTTCTTCTTATTGCTCTGTGTTGGTAGCTCTTTCGATTGTAACAAATCATTCAGAACTAGTGGAATTTGTCTCCAGAGATCTCTTTTCTTCAATTATTCAAGGCTTAGCCCTTGAATCAAATGCAATAATCAGTGCTGATCTAATTGGTCTCTGCCGTGAAATATTTGTGTATCTTTGTGATAGACACCCGGCTCCCCGGCAGGTTTTAATGTCTCTGCCCTCTATTACCCCTCACGACTTGCTTGCTTTTGAGGAATCTCTAACAAAAACATTGAGTCCAAAGGAGCAAAAGCAGCACATGAAAAGCTTGCTTATCTTAGCAAGTGGTAACAAATTGAAAGCACTTGCAGCTCAGAAAAGCGTGAACATCATTACAAACGTTTCAACAAGACCACGCAGCTCAGGCAATGCTTCTGAATCCAGAGTTGATGATGGAGAACCTTTGGGATTGGCTGCCATAATGTAA 5181 0.4349 MGCVISREVSSGIIAEVKEEKSFGADSKSNNKVDGVAEEAQNQNRNHNGGNHREEKSGSEVQKPRGERRRSKKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLVASPRIRFTEPQVRQGSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCLRETFKDFPPSALPLIESLLAFDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDARRQDEEARRIRAASKAQANGPRKHRMRDRAVKAIPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHRIDPDTVPIDVSFTSTTSYIYSKEPFQAWSGPIGNAAAEIGVPKNKRHTATDALDLSKPHKAIATALDWSSTPDARKAAVSFLDSIKAGDIRILANTSFLLVKRNWSSEIRLHAFKMLQHLVRLRWDELSSAEHKNFANLSIDLMSETADPCEDWALKSQTAALVAEIIRREGLNLWKEMFPSLVSLSSKGPIQAELVSMILRWLPEDITVHNEDLEGDRRRLLLRGLTESLPEILPLLYTLLETHFAAALNEAGRNQMEIAKLHAATVTATLNAINAYAEWAPLSDLADAGIINGCGFLLSAPDFRLHACEFFKLVSPRKRPIDASASKFDQAIITIFQILMNISREFLYRSGSNPGSIDEGEYEFVEFICENMVSLGASNLQSIAGDSSILPFYLEQMLGFFRHFKFAIHFQSVHFWLVLMRDLMSKPKSSSHSAVSSSGSGDAENVKKKILSFVNDDFCGAILETSFPHMLKREKILPDTALSLGVLELWSDDFEGKGEFSQYRSRLLELIRFVSSCKPLVAAAKVSEKIDAIIKSLLVSPTQTQDLALMESMQLILENIVSTVFDESNDFAKANAEMQFALRRTFDGLLQQFLSLKWTEPALVEVLGHYLDAMGPFLKYSSDAVGSVINKLFELLTSLPIAVKDTSTSSARRARLQICTSFIRIAKTADKSILPHMKGIANTIGCLQREGCLLRGEHNLLGEAFLVMASVAGIQQQQEVLAWLLEPLSQEWTHSEWQDKYLSEPYGLVYLFSEAQVMWSSFHSVTFFEKALKRSGIKKANWNPENSSTPDSTPINPISPHVSWMLTPLLKLLRTIHSLWSPSVRQTLPGEIQAAMIMSDVERFTLLGEGNPKVPKGSLANVDKSKEGYAEPNESDIRNWLKGIRDSGYNVLGLSTTIGDSFFKTLDVHSVAFALMENIQSMEFRHIRQLVHSVLIPLVKHCPLNMWETWLEKLLHPLFVHAQQALSCSWSCLLQDGRAKVPDVIEIISGSDLKVEVMEEKLLRDLTREICSLLSVIASPPLNPGIPSLEQSGHVSRLDTSSLKSLDTFASSSMVGFLLKHGLALPTLRMCLEAFTWTDGEAVTKISSYCSVLVALSIVTNHSELVEFVSRDLFSSIIQGLALESNAIISADLIGLCREIFVYLCDRHPAPRQVLMSLPSITPHDLLAFEESLTKTLSPKEQKQHMKSLLILASGNKLKALAAQKSVNIITNVSTRPRSSGNASESRVDDGEPLGLAAIM 1726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01009 1726 Gene3D Transferase(Phosphotransferase) domain 1 205 418 - -
Aip06g01009 1726 MobiDBLite consensus disorder prediction 48 67 - -
Aip06g01009 1726 PANTHER EXPORTIN-5 543 1698 IPR040018 GO:0051168
Aip06g01009 1726 Pfam Exportin-5 family 845 1691 IPR045478 -
Aip06g01009 1726 SUPERFAMILY Protein kinase-like (PK-like) 112 384 IPR011009 -
Aip06g01009 1726 Pfam Protein kinase domain 222 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01009 1726 Pfam Protein kinase domain 117 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01009 1726 MobiDBLite consensus disorder prediction 15 89 - -
Aip06g01009 1726 Pfam Exportin 1-like protein 638 796 IPR013598 -
Aip06g01009 1726 MobiDBLite consensus disorder prediction 396 413 - -
Aip06g01009 1726 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Aip06g01009 1726 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01009 1726 Gene3D Phosphorylase Kinase; domain 1 104 199 - -
Aip06g01009 1726 MobiDBLite consensus disorder prediction 386 428 - -
Aip06g01009 1726 SUPERFAMILY ARM repeat 545 1537 IPR016024 -
Aip06g01009 1726 Gene3D - 539 1662 IPR011989 -
Aip06g01009 1726 PANTHER EXPORTIN 1/5 543 1698 IPR045065 GO:0005049|GO:0006611
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01009 Aip-Chr6 14497329 14515505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01009 109 418 Core Cell Cycle Gene Families AT5G10270 47.564 4.23e-94 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aip06g01009 Xpo1 3.1e-27 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01009 K14289 - gmx:100790207 1904.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01009 06 14497329 14515505 Aip09g01835 09 49589875 49596645 ECH
Aip06g01009 06 14497329 14515505 Aip06g01009 06 14497329 14515505 ECH
Aip06g01009 06 14497329 14515505 Aip09g01835 09 49589875 49596645 PCT