Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00975 ATGGAAGTAATTAACAGCACCACAACCGCTGTGCCTGCAACCAACCAAACTTACAAACACTCACATTCACATTCACATTCCAATAATGATTTCCCCTCCAAAACCATTCTCATTAGCATCACTCTCCTCACCTCTCTTACCCTATTCTTTGCCATTTTTCTTGTTGCATTCATGCTCCGTCGTCTCAAATCCAAACACAATGATGACATTTCAACGACACTGCCCTTCGCTTCAAGTAGTCCAGAAGTGAAGGGAGGATGTGTTGATCATCATCATCCAACACCAACAACACCAAATAAATTTCGAGGTGTTCAAGTGTTGACATACAGAGAGATAGAAGTGGCCACAGGTGGAATGAGTGAAGGAAATGTAATTGGCAATGGAGATTCTGGTTTGGTGTACAAAGGAATCCTAAGTGATGGAACTTTGGCAGCAATTAAACTCATGCAAAGGGAAGGGAAGCAAGAAGAGCGTGCCTTCAGAATTGAGGTGGATATCCTAAGCCGTTTGCACTGTCCTTATTTGGTGGAGTTGCTAGGCTATTGTGCGGACCAGCACCACAGGGTGTTGGTGTTTGAATACATGCCTAATGGAACACTCTATCACCATCTCCACTCTCTTAATTACAATAATCAATCTCAGCCGTTGGATTGGTGGACCAGGATGAGAATAGCCCTTGATTGTGCCATGGCTTTGGAGTTCTTGCATGAACATGCTCTCTCCCCTGTCATACACCGTGACTTCAAGACTGCTAATGTTCTCTTGGATCAAAATTTTCGTGCCAAGGTCTCGCATTTTGGATTGGCCAAGACTGGCTCTGACAAGATCAACGGTCAGATTTCCACCCGCGTGTTAGGGACCACCGGATATCTCGCACCCGAGTATGCATCAACGGGAAAGCTTACTACAAAATCTGATGTATATAGCTATGGTGTGGTTCTTCTGGAAGTGCTAACCGGGCGCGTACCGGTTGATATTGAGCGACCTCCGGGAGAACATGTACTTGTCTCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGACCCTGCTCTTCGAGGACAGTACTCAAAGAAGGATCTAATTCAGATAGCAGCAATAGCAGCAATGTGCATACAAACAGAAGCAGATTACAGGCCACTAATGACGGATATTGTTCAATCACTGATACCACTTGTTAGGAATCCCTCCTCCTCTTCTGTTACTTCATCATCTAGTTCCCTAAGATTTCTTAAAAGTCCAACCTATTAA 1266 0.4439 MEVINSTTTAVPATNQTYKHSHSHSHSNNDFPSKTILISITLLTSLTLFFAIFLVAFMLRRLKSKHNDDISTTLPFASSSPEVKGGCVDHHHPTPTTPNKFRGVQVLTYREIEVATGGMSEGNVIGNGDSGLVYKGILSDGTLAAIKLMQREGKQEERAFRIEVDILSRLHCPYLVELLGYCADQHHRVLVFEYMPNGTLYHHLHSLNYNNQSQPLDWWTRMRIALDCAMALEFLHEHALSPVIHRDFKTANVLLDQNFRAKVSHFGLAKTGSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEVLTGRVPVDIERPPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQTEADYRPLMTDIVQSLIPLVRNPSSSSVTSSSSSLRFLKSPTY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00975 421 Pfam Protein tyrosine and serine/threonine kinase 122 394 IPR001245 GO:0004672|GO:0006468
Aip06g00975 421 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Aip06g00975 421 Gene3D Transferase(Phosphotransferase) domain 1 195 413 - -
Aip06g00975 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Aip06g00975 421 MobiDBLite consensus disorder prediction 1 28 - -
Aip06g00975 421 Gene3D Phosphorylase Kinase; domain 1 92 194 - -
Aip06g00975 421 ProSiteProfiles Protein kinase domain profile. 119 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00975 421 CDD STKc_IRAK 125 397 - -
Aip06g00975 421 PANTHER OS01G0750732 PROTEIN 15 415 - -
Aip06g00975 421 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 15 415 - -
Aip06g00975 421 SUPERFAMILY Protein kinase-like (PK-like) 93 394 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00975 Aip-Chr6 13793859 13797516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00975 34 420 Receptor kinase-like Gene Family AT3G58690 54.847 1.82e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aip06g00975 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00975 - - jre:109008160 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00975 06 13793859 13797516 Aip06g00975 06 13793859 13797516 ECH