Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00971 ATGGCCTTCTCTGCAATTGCATCTTCATTCACACTGCTTCTTCTCATTCTCATATTACTATTCTTCTTCGTAAATTTACCATCTTCTCCTTCTCTCTTCTCCACCTCCACCGCCACCGTCACCACACGCAGGTCTCTTCTAACCACCACGTGTTCCGCTGACGAGGGATCCAATGGCGGGATCCTCAACTACCTCTACATCCACAACTGCCTATTCCGCCGCAACGCCCTCCTCTCCATCCCCGCCCTCTCGATGCTCCTCCTCCTCCAATTCTACATCCTCATCAAGACCGCGCAGCACCACTTCTCCGTCGTCACCACCAAGCTTGCCTCTCACCTCAACCTCTCCCCCTCCATGGCCGCCGTCACCCTCCTAGCACTCGGCAACGGCTCCCCCGACGTTTTCTCCTCCCTCGCCGCCCTTCGCTCCGGGCAGTACCGCACCGGATTCGGCGCCATCCTCTCTGCCGGTACCTTCGTCTCCGCCCTCGTTGTCGGATTCGTCGCCATCTACGCCGCTCCGTTCTCCCTCGATCCCGCGCCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTGTATCTTAGCGCCGAGATCTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATGCATTCTTCGTTGGTCTCGTGTTCTATATGGACTTGGGACTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTCGGGATCTATGAACGACGAGAAGCGCAGTTCTGGATTCCCGGGAGCTTATGGATTGATTTCTAAAGCATGGGAGATTCCTGTTGCAACTCTCTTAAAACTGTCGATCCCCGAGCCAGCGCCGTCCCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCCCTTTGTCCGATAGCCCTCTTGTATGCCTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCCTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTCACCACAAGCTTCTGCCTTGCATGCCTTCATTTAGTAATGGAAAAAGAACCTCCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCATTTGTTATGAGCGTGTTTTGGATATCTACCACAGCTGGAGAACTGGTGAACTGCCTTGAAACTTTAGGTCTAGTTCTCAAACTACCACCAGCAATCCTCGGTCTCACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTCGTTGCCGATGTTGCGGTAGCTAAAGCCGGTCATCCGGCTATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTAGGTCTTGGAACAGCTCTGGTGATTCAGACGGCAAATATTCACCCTAAAGCCTATGTGCTTAATTTCCACGTAGGTATCGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCCGAGTGCCTAGGTTTTGGGGGTTTTGTCTCGTCGGCCTCTATGTTGTTTTTGTAGCAGTGAGTTTGATGGTGGCCATGTTTTCAGGGTGA 1608 0.5224 MAFSAIASSFTLLLLILILLFFFVNLPSSPSLFSTSTATVTTRRSLLTTTCSADEGSNGGILNYLYIHNCLFRRNALLSIPALSMLLLLQFYILIKTAQHHFSVVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRSGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSLDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFYMDLGLVDGRGKSGNSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRSSGFPGAYGLISKAWEIPVATLLKLSIPEPAPSQWSRLYSSANIALCPIALLYACKSFVPFDHPIAFLLPNTDLPLWSVVLTTSFCLACLHLVMEKEPPKTEQIPVVVMAFVMSVFWISTTAGELVNCLETLGLVLKLPPAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIHPKAYVLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYVVFVAVSLMVAMFSG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00971 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 48 244 - -
Aip06g00971 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 281 534 - -
Aip06g00971 535 Gene3D - 308 530 IPR044880 -
Aip06g00971 535 Gene3D - 115 244 IPR044880 -
Aip06g00971 535 Pfam Sodium/calcium exchanger protein 379 528 IPR004837 GO:0016021|GO:0055085
Aip06g00971 535 Pfam Sodium/calcium exchanger protein 84 224 IPR004837 GO:0016021|GO:0055085
Aip06g00971 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 48 244 - -
Aip06g00971 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 281 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00971 Aip-Chr6 13753047 13755287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00971 4 534 Antiporters AT1G08960 66.179 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00971 K13754 - gmx:100775437 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00971 06 13753047 13755287 Aip06g00971 06 13753047 13755287 ECH