Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00952 ATGCAAGATATATTCGGATCAGTTCGGCGATCGCTGGTGTTCCGTGCTTCGCCTGAGAACGAAGAGCACTCGCTGAGAGGAACCCTAGTTGATAAGATCGGTTACTGTATACGCAATTCCAGAGTCTTCTCTAAGCCCTCACTGTCGCCACCGTCCTTGCCGCCGATTCCCAAGGACGTTGCTGCTGCTGCTCCGCCGCCGCCTACGATCCGATGGCGCAAGGGCGAGTTGATCGGTTGCGGCGCCTTTGGCCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAACTTTTAGCAGTTAAACAGGTTTTGATTGCAGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCATGTAAAAGAGCTCGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACAGTTAGAGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTCCCTGGTGGATCCATATCATCACTGTTGGGGAAATTCGGAGCTTTCCCTGAGGCAGTCATAAGAACTTACACAAAGCAGTTGCTGCTTGGACTTGAGTACTTGCACAAAAATGGAATAATGCACAGAGATATTAAGGGGGCCAACATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTGTTGAGCTGGCTACTATTTCGGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGACATATGGAGTGTGGGTTGCACTGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGCCAACAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCGCCAATCCCTGATCATCTCTCTGTTGCAGCCAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCATATTTGAGGCCATCGGCATCAGAACTACTGCAGCATCCCTTTGTTACTGGTGAACCTATGGATTCTCTTCCTGTTTCATCTACTGTCGTGAAAAATTTGGAAGCTTCATCTTCTTGTGCTCCAAATGTTGAATCCTTCCTTCGTTGCTCAAATTTGAATCTTGAGGACTCAGGAAATAAAGAGTTATGGGGAATTAGCAACGATGATGATGACATGTGTATGATTGATGACGACGAGGAGTTCTCTCAGAATGATGTCAAACACGAACCTTTGATCTCAGAAAATATTGAGAGCTTCAACCTGATGTCAGATCCCTCTGATGATTGGGTGTGTAAGTTTGATGGAAGTCCGGAATTGGAACATAAAGGAGTCAGTTTTGGCACAGATGAAAATGATAAGTCACTTGGTCACTTAGGGGATTATAACAAGGAGCAGAAAGATTTTTCCTTTCCAAGCGTGCCATCTCTATCAGAGGAAGATGATGAGCTCACGGAGTCAAAAATTCAAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAGAAGCTGCAGACACCTTTATATGAGGAGTTCTACAACAGTTTAAATATGTCTTGTTCACCAAGTGTGATTGATGGAACAAGTGATGAAACTGCTTCTCGGAAGTTTTTGAAATTACCTCCTAAGAGTAGGTCACCAAGTCGGGTACCAAGCACTCCATCTAAAGCAGCTGACAATACTGGAAGTCCTGGAAGTAATGGCAGGTCCGCATCAACTGTTGGCAATGTAAATGATCATAGTTCACAGGACCTTCCATCTTCTCCCCTTAATGAATTTAAAGGGCTGATAGTTGACTCCCAGCAGGAACCTGGTAGCCCAAGTTTAAGCTTTTCGAAACAGAGAGAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAAAGAAAACGAGAATGGAGGCGCCAAGCAGGGGTGGGGTCAAAGACTTCTTCACCAAAGGATAGAGCTTTACATCGGCAGAGAGAGCGGACACGATTTGCTTCTCCCAGCAAATAA 1986 0.4502 MQDIFGSVRRSLVFRASPENEEHSLRGTLVDKIGYCIRNSRVFSKPSLSPPSLPPIPKDVAAAAPPPPTIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSVAAKDFLLKCLQKEPYLRPSASELLQHPFVTGEPMDSLPVSSTVVKNLEASSSCAPNVESFLRCSNLNLEDSGNKELWGISNDDDDMCMIDDDEEFSQNDVKHEPLISENIESFNLMSDPSDDWVCKFDGSPELEHKGVSFGTDENDKSLGHLGDYNKEQKDFSFPSVPSLSEEDDELTESKIQAFLDEKALELKKLQTPLYEEFYNSLNMSCSPSVIDGTSDETASRKFLKLPPKSRSPSRVPSTPSKAADNTGSPGSNGRSASTVGNVNDHSSQDLPSSPLNEFKGLIVDSQQEPGSPSLSFSKQREWKEELDQELERKREWRRQAGVGSKTSSPKDRALHRQRERTRFASPSK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00952 661 Coils Coil 105 132 - -
Aip06g00952 661 MobiDBLite consensus disorder prediction 442 481 - -
Aip06g00952 661 Gene3D Transferase(Phosphotransferase) domain 1 71 364 - -
Aip06g00952 661 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 628 - -
Aip06g00952 661 SMART serkin_6 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00952 661 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 628 - -
Aip06g00952 661 Pfam Protein kinase domain 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00952 661 ProSiteProfiles Protein kinase domain profile. 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00952 661 SUPERFAMILY Protein kinase-like (PK-like) 71 336 IPR011009 -
Aip06g00952 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Aip06g00952 661 MobiDBLite consensus disorder prediction 547 587 - -
Aip06g00952 661 MobiDBLite consensus disorder prediction 442 464 - -
Aip06g00952 661 MobiDBLite consensus disorder prediction 611 633 - -
Aip06g00952 661 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Aip06g00952 661 Coils Coil 612 632 - -
Aip06g00952 661 CDD STKc_MAPKKK 71 335 - -
Aip06g00952 661 MobiDBLite consensus disorder prediction 642 661 - -
Aip06g00952 661 MobiDBLite consensus disorder prediction 535 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00952 Aip-Chr6 13489092 13493576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00952 1 661 MAP Kinase Kinase Kinase AT1G54960 57.303 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip06g00952 Pkinase 3.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00952 K20606 - gmx:100807537 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00952 06 13489092 13493576 Aip06g00952 06 13489092 13493576 ECH