Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00941 ATGGCTCCAACTAGGAAGCCTAGAAGTATGAATAAGCGATTCTCGAGTTTAAATGAGGTCTCTCCCGAGAAAGAGGGAATGAACTCAAATAAAAATAAGCAAAGGAAGAAAAAGCTGTCGGATAAATTGGGATCTCAGTGGAACAAAGATGAGCTAGAGCGTTTTTATGAGGCATATAGGAAGTACGGAAAAGACTGGAAGAAGGTTGCTGCAGCTGTACGCAACAGATCTGTTGAAATGGTGGAGGCTCTTTACAATATGAACAGGGCTTACCTATCTCTGCCGGAGGGAACAGCTTCTGTTGTTGGTCTCATTGCAATGATGACAGATCACTATAATGTGCTGGAAGAGAGTGATAGTGAAAAAGAGAGTATTGATTCACCAGGATCCCGAAAACCGGTGAAACGAAAACGTGGAAAAATTGAGCTTGGTGCCTCAAAAGATTCTGTCCATACTCAGTCAATTGCTTCTAATGATGGTTGCCTCTCTCTGTTGAAGAGAAGACGCTTTGATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGTGTTCCAGTTTACTACTCTTATAAGAAAGATGAAAGGGAAAATTATGTTTCGCCTAATAAAAGAATGTTGAAGTCGGTCTTTGATGCTAATGATGATGAAGTTGCACATGTTGCAGCACTGGCGTTAACTGAGGCTGCAAAAAGAGGTGGCTCTCCTCAAGTATCCCAAACACCACACAGAAGATCACAGCAGAAGTTCTCTCCTGTTCAGAGCTGGGAAAGAATGCAACAATCTGGGACAGTTCCTGCCAAGTTTTATGACACATCTTTGGATGAGGAATTCATGGAAGGTAGTATAGAAAGCAGGGGTGCTGAAAATGGGGAACAAGCTAGAGATACTAGCTCCTTGAAGGATATGGAAGGTAGTGGCACAGTTGAAGTTAATCAGAAACGAAAAAAGGTATATAGAAAGAAAGAGAGAAAGGAAAATGTTGGAAACCATCTTCTTGATGATGGCGGAGAAGCATGTAGTGGCACCGAAGAAGGACTTAATTTTAGCTTGAAGGAAAAAGTTGATGTTGAGGTTACTAATGCAAAACCCCAGAAAAGGAGTAAGAAACTTTTCTTTGGAGCTGATGAAAGCTCTGCCGTGGATGCTTTGCATGCTTTGGCTGATCTGTCATTAATGATACCGGCGTCTACTATGGAATCTGAATCATCTGTCCAGTTGAAGGAAGAAAGAACAACTGTTGATAAAGACGAAAAGCCTGCTGTGCCGGAAGTCACATCAACCAGCCAAAACAGAGATAAAAGTAAACTTAGTTTGAAACAGAAGGTCGTTCCTTCAGTTCGTGGAGTTGAGCTTTCATCATCCAGAAAGTCTAAAGTTGGAAGGACAACAATAAATGATAAGGAAAGTAAGGCTCTGTTTGAATCAAAAGAGCTGCTTCCCACTGATGATAAAACATGGAAAAGAAAGCGCAAACCCATGGTTCCAAAGCTGGCCAATGCAAAGCATGATTCTGATCCAAATGATCCATTAAATGATGAGGCTGTAGATGAAGAGGACAAACCATTGATTAAAGGAAAGCACACTGGTCAGACATCCACTCCAGCAAAGCAAAAGTCAGTAAGATCATCAGAAAGTTCTCTGTGTGCTGACCAGAAGGATTTGATCGTATCAACTGCAGAAGTTCAACTTGTTAGTTTACCAACTAAACGAATTAGTAAACGTAAAATGAGTTTGCCGAGAACATTTATACCCAAAGAGAAGTCTTCTGAGAACAAATTAAAAGGTCAACCTAATAAGTATTCTAGCCCACCCCAAGATAAGGCATCAATTCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTTCTATGATTCGCAGGTGGTGTGCATTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTTCCAAACGGGAGTTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGATTGACTCGTGTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGATTCTCTGAACACTTCCTTCGAGAAGAAAGACAAAAGCTTGAACAGTACAGGCAATCTGTTAGGAAACATTACACTGAACTGCGGACTGGTATCAGGGATGGACTACCAACAGATTTAGCTAAGCCTTTATATGTTGGACAGCGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGAAGTGTGCTTACAGTTGACCATGACAAGTGCAGGGTTCAGTTTGACCTTCCTGAATTGGGTGTTGAATTTGTCATGGACATTGATTGTATGCCTTTGAATCCATTGGATAATATGCCAGAAGCTCTAAGGAGGCAGGTTGGTGCTTGTAAATTCCCTTGTATAAGTAAAGAACCACAAATGGATGGAATTTCAAGTTTTGGGGGCTGCCTGACATGCACTTCAAGCAATCCTGTAGAGAGAGCACCCAATTTGGCTAAGCAGGAAAAGCAAGCAGTGGGTGCTCAACCATGTAACATGACAGACCATCAAACCAAGGAAGCTAACATACATGCCCTTTCTGAGCTGACACGTTTTCTTGATAAAAAGGTCTCCATGGGCATAAATGAAATACTGTTAATGGAGCTTAAAAATAGCAACAATGCCATATTGGAGAACCAAATTGATAGTGGCAGCTTTAAAGATTCAGAGGCGCTCGGGAAACATTATGCTACGGTTTCTAATGCTCTGCTTCATCTGAGGCAACGTAATACTTACACAGGAAACTCCCTACCACTGAAACCCCAAGCAAATTTAAATGTCCATGATGGCCTTCCCGGTATGTTGGATGGTTCTCTGGCTCAAGAGTTAGGATCAACTGTTATTGAAATTATTAAAGGATCCAGGGTAAAAGCACATGCAATGGTGGATGCTGCATTTCAGGCCTTAGCTTCAGTGAAGGAAGGCGAAGATGCTTTCCTCAAGATTGGACAGGTATTGGATTCTATCAATTATCAGCAGTTGGCCCACAACACTTCCTTGCCTGCAATGAAGTCCCAAGAGCAAGGGAATGGAAGTCTCGATAACCATACTCGATCAATTTTCTCTTCATCTGAGCCTTTACTTAATGATGTATCTGGTCAAAAATTGCGTAATGATTCTGACAAAGTAGACGCTCAAATTCCTTCTGAACTCATCACTTCCTGTGTTGCCATATTGATCATGATTCAGACTTGTACTGAACGACAATATCCTCCATCCGATGTGGCTCAGATATTAGATTCTGCTGTCACCAGCCTGCATCCATGCTGTCCCCAAAACCTTCCAATTTACAGGGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCAACATCCACATGA 3384 0.4158 MAPTRKPRSMNKRFSSLNEVSPEKEGMNSNKNKQRKKKLSDKLGSQWNKDELERFYEAYRKYGKDWKKVAAAVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSEKESIDSPGSRKPVKRKRGKIELGASKDSVHTQSIASNDGCLSLLKRRRFDGSQPRAVGKRTPRVPVYYSYKKDERENYVSPNKRMLKSVFDANDDEVAHVAALALTEAAKRGGSPQVSQTPHRRSQQKFSPVQSWERMQQSGTVPAKFYDTSLDEEFMEGSIESRGAENGEQARDTSSLKDMEGSGTVEVNQKRKKVYRKKERKENVGNHLLDDGGEACSGTEEGLNFSLKEKVDVEVTNAKPQKRSKKLFFGADESSAVDALHALADLSLMIPASTMESESSVQLKEERTTVDKDEKPAVPEVTSTSQNRDKSKLSLKQKVVPSVRGVELSSSRKSKVGRTTINDKESKALFESKELLPTDDKTWKRKRKPMVPKLANAKHDSDPNDPLNDEAVDEEDKPLIKGKHTGQTSTPAKQKSVRSSESSLCADQKDLIVSTAEVQLVSLPTKRISKRKMSLPRTFIPKEKSSENKLKGQPNKYSSPPQDKASILKEKLSSCLSSSMIRRWCAFEWFYSAIDYPWFSKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRQSVRKHYTELRTGIRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDHDKCRVQFDLPELGVEFVMDIDCMPLNPLDNMPEALRRQVGACKFPCISKEPQMDGISSFGGCLTCTSSNPVERAPNLAKQEKQAVGAQPCNMTDHQTKEANIHALSELTRFLDKKVSMGINEILLMELKNSNNAILENQIDSGSFKDSEALGKHYATVSNALLHLRQRNTYTGNSLPLKPQANLNVHDGLPGMLDGSLAQELGSTVIEIIKGSRVKAHAMVDAAFQALASVKEGEDAFLKIGQVLDSINYQQLAHNTSLPAMKSQEQGNGSLDNHTRSIFSSSEPLLNDVSGQKLRNDSDKVDAQIPSELITSCVAILIMIQTCTERQYPPSDVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPTST 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00941 1127 MobiDBLite consensus disorder prediction 580 594 - -
Aip06g00941 1127 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Aip06g00941 1127 SUPERFAMILY Homeodomain-like 42 90 IPR009057 -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 116 132 - -
Aip06g00941 1127 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1125 IPR028306 -
Aip06g00941 1127 PANTHER LIN-9 1 1125 IPR010561 GO:0006351|GO:0017053
Aip06g00941 1127 MobiDBLite consensus disorder prediction 461 490 - -
Aip06g00941 1127 CDD SANT 47 81 IPR001005 -
Aip06g00941 1127 SMART sant 43 91 IPR001005 -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 230 262 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 9 25 - -
Aip06g00941 1127 Pfam DIRP 633 734 IPR033471 -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 282 323 - -
Aip06g00941 1127 Gene3D - 4 99 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 26 44 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 404 422 - -
Aip06g00941 1127 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 398 545 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 578 607 - -
Aip06g00941 1127 SMART DIRP_2 634 735 IPR033471 -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 527 545 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 233 262 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 282 299 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 1 44 - -
Aip06g00941 1127 MobiDBLite consensus disorder prediction 116 139 - -
Aip06g00941 1127 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00941 Aip-Chr6 13244456 13254298 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip06g00941 DIRP 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00941 - - gmx:100816217 1449.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00941 06 13244456 13254298 Aip06g00941 06 13244456 13254298 ECH