Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00922 ATGATGAAGAGGGAGATGGAGGCAACAGACATGCAGAGGCGCGTGAGGGCTCTGATGGTGGAGATGAAAGTGGTGGTGGATGCAGCAGAACCTTCAGTGGTGCGTGCCGACGCGTCCAGTAGCGGCAGAGGGTGGAGTTTTCCTCGTTCCGCTCTAAACAACATGGCCAAGAGGATGGTGAAGATGAAAGTGGTGGTGGACGCGGCAGAACCTTCAGTGGTGCGTGCTGATGCATCTAGTAACGGCGGAGGGTGGAATTTTGCTCGTCCCACTCTAAACAACATGGCCAAGAGGATGGTCGTCGGTCACCGGTGGTCGGAGAAGCTCGTCGCGGGAGGGCGTGACGCTCTGAAGGTTAGTCACTGCCTTCCTGCTATTGCTTTCCCGGAAGCTCTAGCAGACAAGACCAGCAACTGGTCCGTGGGGTGGTGGTCGTTGTTGTCATTTTGCTTATCCAATCAGTTTAGTTTCTCATCTACTATCGCCGTCAGTAGCCATCCGGGCAATTGGCAAGTGGAGGTTGTCAGGATGTTGGAAGCATGTTGGATAGTAGATGAGGTGGTAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGATTACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGAATGCATTCCACATAATGCCAGCTGGTAGCGAAATGTTTGTCTTATTCTTTCAGGACACAATATTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGTTTTTTGGGCTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGAAGTTTTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTAGTAACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTCTCGCATTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGAAAGATATCTGAGGTAGAAGTTGCTCAGTTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTAGGGGGCTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAAAGGTCTGCAAGGTGGAGACGTCAGTGCAGCTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGATACAAGTTGGGGGCAGGGCAACACCTATGCAACTTGTTTTGGAGCGACGGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCATTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAACAATGGTCTCATGCGAATCGTAG 1629 0.4917 MMKREMEATDMQRRVRALMVEMKVVVDAAEPSVVRADASSSGRGWSFPRSALNNMAKRMVKMKVVVDAAEPSVVRADASSNGGGWNFARPTLNNMAKRMVVGHRWSEKLVAGGRDALKVSHCLPAIAFPEALADKTSNWSVGWWSLLSFCLSNQFSFSSTIAVSSHPGNWQVEVVRMLEACWIVDEVVIMASSSKFCKDACMWNEPLADYWMEGNAGVSNPQNAFHIMPAGSEMFVLFFQDTIFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMKFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSHFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQKGLQGGDVSAAIRYLEGLARMDGKMFWRYKLGAGQHLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPIVVFSGVNHHNQTCVFGTTMVSCES 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00922 542 Pfam MULE transposase domain 502 542 IPR018289 -
Aip06g00922 542 PANTHER OS02G0262500 PROTEIN 278 541 - -
Aip06g00922 542 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 278 541 IPR031052 GO:0006355
Aip06g00922 542 Pfam FAR1 DNA-binding domain 293 382 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00922 Aip-Chr6 12879598 12887294 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g00922 FAR1 3.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00922 - - aip:107620408 696.812