Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00919 ATGGGTCTCGGCACCGACAACGACAACAATGACGACGGAGTCACCAACCCTTCTCCCTCCGTCTCTTGCTCTATTTGTCTCGAGCCCGTTGCCCGCAGCGGCGATAGATCCTGGGCCAACCTTCAATGCGGCCATCAATTTCACCTCGATTGCATTGGCTCAGCCTTCAATATAAAAGGGGCAATGCAATGCCCTAATTGCCGGAAGATTGAGAAAGGCCAGTGGCTTTATGGTTCCCGGTCATATCCGGAGTTCAGCTCAGACGATTGGACACATGATGAGGATCTATACGATCTTAGCTACTCTGAAATGTCCTTTGGAGTTCACTGGTGCCCTTTTGGTAACTTGACCCGACTTCCTTCTGCCTTCGAAGAAGGGGAATTTTCATCAACTGCATATCCTGATATACTCGGACACCATGCTATATTTGCGGAACATACAGCAGTGTCATCTGGTAGTCATCCTTGTCCGTATATAGCTTATTTTGGACCTATACATCCCTCCACCTCCAACTCTGGCGGAAATGGCTCGGAAGCATCTAACTTCAACCACTGGAGTGGCCCTCCTATACCTAGCGACTTGCCAACCTCCTATGCGTTTCCAGCCTTGGATCTCCATTATCCCAGTTGGGAACACCATTCATCTCATTTTTCTTCTGCGAACAGCCGTCTAGGCACTGCAGATCAGCCCTCAGTATCGCCTGGTAGTCAAAGGCCAGGCAGGGGTAGTTTGGAGATCCCAAGATCGGGATCTTTTATGCATCCCTTCATTGTTGGTCACAGTTCTGGTGCTAGAGCTGGGGCATCAGTTGCATCTTCAATGATACCTCCATATCCAGGTAGCAATGCCCGGGCCCGAGACAGAGTCCAGGCTCTTCAGGCATACTATCAACCTCCACAACCTCCTAATTCTACCTCAATGCGGACTCCTAATGCCTCTGACACTAGAAGGTCCAGCAGCCATAATGGGTCAGCTCAATTAGCACAAGTGGCCTCATCACCAGACCAAAGCGGTGGCTTCTTATTGATTCCATCAGGTTCATCGGGACGCAATTTTCCGGAAGAAGCCCATCTGCCAAGTCGCTTCCAAGCTTGGGAAAGAGATCACTTGCCTTCATTATCATTCAATCATGTGGATAGAGAATCAAGTTGGAGAGCATACCACCAGGCTGCCAGTGGATCAGAGCCAAGTTTCAGGTCCAGCAGCTTTCAGTTGAGGCACGGATCAGAAAGAATGCCTTCACAAAATCGATGA 1254 0.496 MGLGTDNDNNDDGVTNPSPSVSCSICLEPVARSGDRSWANLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYGSRSYPEFSSDDWTHDEDLYDLSYSEMSFGVHWCPFGNLTRLPSAFEEGEFSSTAYPDILGHHAIFAEHTAVSSGSHPCPYIAYFGPIHPSTSNSGGNGSEASNFNHWSGPPIPSDLPTSYAFPALDLHYPSWEHHSSHFSSANSRLGTADQPSVSPGSQRPGRGSLEIPRSGSFMHPFIVGHSSGARAGASVASSMIPPYPGSNARARDRVQALQAYYQPPQPPNSTSMRTPNASDTRRSSSHNGSAQLAQVASSPDQSGGFLLIPSGSSGRNFPEEAHLPSRFQAWERDHLPSLSFNHVDRESSWRAYHQAASGSEPSFRSSSFQLRHGSERMPSQNR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00919 417 MobiDBLite consensus disorder prediction 217 248 - -
Aip06g00919 417 CDD RING-H2 23 68 - -
Aip06g00919 417 MobiDBLite consensus disorder prediction 217 238 - -
Aip06g00919 417 PANTHER PROTEIN, PUTATIVE-RELATED 1 417 - -
Aip06g00919 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 77 IPR013083 -
Aip06g00919 417 PANTHER OS09G0511500 PROTEIN 1 417 IPR044274 GO:0004842
Aip06g00919 417 Pfam Ring finger domain 22 68 IPR001841 -
Aip06g00919 417 SUPERFAMILY RING/U-box 21 70 - -
Aip06g00919 417 MobiDBLite consensus disorder prediction 388 417 - -
Aip06g00919 417 MobiDBLite consensus disorder prediction 296 354 - -
Aip06g00919 417 ProSiteProfiles Zinc finger RING-type profile. 23 68 IPR001841 -
Aip06g00919 417 SMART ring_2 23 67 IPR001841 -
Aip06g00919 417 MobiDBLite consensus disorder prediction 296 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00919 Aip-Chr6 12852958 12857404 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00919 - - ahf:112758092 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00919 06 12852958 12857404 Aip09g01650 09 36560513 36569181 PCT