Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00913 ATGTTTGAAACCCTAAACCTCCATGAGCAGTCGCAGAGAGTGTGGGAGTGGAAGAGATGGGCGAGCAGGCGCAGCGTCGGAGAAGCTCTTGGTTCCAACACACAAAACACAGCCAAAGCTGCAATGGGGATCGATATTAAGGCTGGCGGCAAGAGCAAAAAGACCAAAAGGACCGCACCCAAGTCCAATGATATCTACCTCAAGCTCCTCGTCAAGCTTTACCGCTTCCTAGTGAGGAGGACCGGCAGCAATTTCAATGCCGTGATACTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCGCTTTCTTTGTCACGCTTGATTAAGTTCATGAAGGGCAAGGAAGGTAAAATTGCCGTTGTAGTGGGAACTGTAACCGATGATATCAGAGTGTATGAAGTTCCTGCATTGAAGGTTACTGCACTCAGGTTTACAGAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCTCCTCTCGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAACTCCAGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGagggctagaggaaggaggaacagcaaaggatttagggtttaa 687 0.4614 MFETLNLHEQSQRVWEWKRWASRRSVGEALGSNTQNTAKAAMGIDIKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00913 228 Gene3D - 42 228 - -
Aip06g00913 228 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 42 227 - -
Aip06g00913 228 PANTHER 60S RIBOSOMAL PROTEIN L18 42 227 IPR000039 GO:0003735|GO:0005840|GO:0006412
Aip06g00913 228 MobiDBLite consensus disorder prediction 192 228 - -
Aip06g00913 228 Pfam Ribosomal protein 60S L18 and 50S L18e 43 228 IPR021131 -
Aip06g00913 228 MobiDBLite consensus disorder prediction 205 228 - -
Aip06g00913 228 SUPERFAMILY Ribosomal proteins L15p and L18e 61 180 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00913 Aip-Chr6 12736116 12739362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00913 44 228 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 1.84e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00913 K02883 - csv:101209626 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00913 06 12736116 12739362 Aip09g01635 09 35723516 35725725 PCT