Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00886 ATGAACACACTAAGCCAAGCTGGAGACTTAAAGCGGAGACGTGAGGAGGGAGGCATCTGGACTGGAAAATATGTGAAGCTCAACATAGAAACGGAAATCGTGCCGGCTCTCACAAAATTCATTCGGAAAGTGGTAAAGGAGGAGTTGGAGAGCAAACTGTCCGTGGCGGAGCTCAAAGCATCACTACATTCAGGCGTAACGACGACATCTGCTAGGGCGGCGGAGAAACGCTACAAGTTGGTTTTCAAGGGTGATTTGGGTGATACAATTTATAAAGACTCCAAAATCAAAGCGAAAGAAAATGATGTTGAGGTTTCTCTATATGATACTGTGAGTAATTCAGTAGTAACACATGGCCCACTGTCTTCCATTAAGGTCGAGATTTGTGCCCTCAACGGCGATTTCGGCTCCAATGGAAGGTGGAGCACAAGCGAATTCAAGCACAACATCGTTCACCAAAGAGAAGATAAAGCCATGTTACTAAAAGGAAAAACGGTTATCACACTAAAGGAAGGAGTTGGTCACATCAACATGAGCTTCACCGGTAACTCAAAGCGTACAAGAAGCAGCCGTTACAGATTAGGAGCCATTGTTCACTTACCTTGTCATCAACAACACGTCGGAGAAGCTGTAAGCAATCCTTTCAGGGTCAAGGAAAGCAGAGGGAATAAGAAGCATTACCCTCCCTCACCTAAGGACGAAATATGGCGATTGGTCAACATATCAAAAGATGGTCACGTCCATGACCGCCTCTTTCGTCACCTTAAAATCCAAACTGTTGAGGATCTCTTGCGTTTTGACAACCCCACCGATCTTCCTTTGTTACAAAAGACATTTGGCCAAAGTCCAAGAAAGCTGAGGGAAACACTTAAGCATGCTAAGACTAGTTGTTATCCTCCGCCGGCAGTGACATGTCAAGGACAAAAGTGTCATCCGCAGAATATTATCATCAACTCCGATGATGATAAGCAGCATGTTGAGGAGACACTAGCATTTGCACATACCTTTCCAGGCCCAATGGCAAGTCTACAACATCAAGATCAACTAGGAACGGGGCAAGATTTTGTCCAACCTTCTACCTCAACACCACACGTTGCTGGAGCAGATAACAATGGCCAGTTTGATTTTGAAAAAGAACTGTTTGAGCTACTATATATCCCCTGA 1164 0.4467 MNTLSQAGDLKRRREEGGIWTGKYVKLNIETEIVPALTKFIRKVVKEELESKLSVAELKASLHSGVTTTSARAAEKRYKLVFKGDLGDTIYKDSKIKAKENDVEVSLYDTVSNSVVTHGPLSSIKVEICALNGDFGSNGRWSTSEFKHNIVHQREDKAMLLKGKTVITLKEGVGHINMSFTGNSKRTRSSRYRLGAIVHLPCHQQHVGEAVSNPFRVKESRGNKKHYPPSPKDEIWRLVNISKDGHVHDRLFRHLKIQTVEDLLRFDNPTDLPLLQKTFGQSPRKLRETLKHAKTSCYPPPAVTCQGQKCHPQNIIINSDDDKQHVEETLAFAHTFPGPMASLQHQDQLGTGQDFVQPSTSTPHVAGADNNGQFDFEKELFELLYIP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00886 387 Pfam Calmodulin binding protein central domain 231 296 IPR046830 -
Aip06g00886 387 Pfam Calmodulin binding protein-like N-terminal domain 78 219 IPR046831 -
Aip06g00886 387 PANTHER OS02G0177800 PROTEIN 33 296 IPR012416 GO:0005516
Aip06g00886 387 PANTHER CALMODULIN-BINDING PROTEIN 33 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00886 Aip-Chr6 12239876 12244422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00886 35 303 Calmodulin-binding Proteins AT5G62570 34.909 4.96e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00886 - - aip:107645946 777.319