Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00885 ATGGCACTAAACAAGCGAGCATCGTCATGCAATGAGGGAAATGATGAGAGAGACCTTCAAGTCTCTCTTTGTAAACGAAAAGCAGTGCCAGACACCCGCACTGCTTCCGGTATTAGTTCCACCAATGACATGGCGTTCCTCCGGGAATCTAAATTTAAGAGAGTGTTAGAACAGGTTATTCCATCAATGCTAGAACAGGCAATTCCGCCTATGTTAGAAAAGGTGATTCCGCCTATGCTAGAACAGATGATTCCACCTATGCTGCACCGTTCGCTATCTTCCCCATGTCATGGATTTTTGGTCAAGCGGAAGATTAGTCCAGCAGCAGGTGGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTTCAACCATTTTCACACACATCAACATCAGAGCGGAGGACAGTTCCACGCTCCAAGTTGCGGTGTGCGATGCCACAGTTCAGCACTCCAAGGTCACCATGGGAGATGGTCCCTCCTTGAAGGTCCAGCTATGCGTCCTGAGGGGTGACTTTGAAATTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCAAAGAGAAGGAAAAGGACCATTGCTCAAGGGAGACACGGTTATTACCATTGAAAATGGAGTTGGCTTTTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACCAGAAGTGGCAAGTTCCGGATTGGAGTTAGAGTACTGCATTCGAATTCTCCCGCTGTAGCAGACATCAAAGAAGGAAGAAGTGAGCCTATAAGGGTGAAGGATAAGCGAGGAGTCGCAAATCAGAAACCGGATCGTCCTTCATTAGATGACAAGGTGAGTTGTCTGCATAAGATCTCGAAATATGGTCAGATCTGCAGGCAGTTGTCAGACGACGGAATTAAAACTGTCAAGGATCTGTTGCGCCGGCACACAACTGACCAAGCTTCACTAAGACAGATTGCGGGGAAGTATTGGGAGAAGATTATTGAGCATGCTAAGTCTTGTGAGATAGATAAAAATGAGCGCTACATCTACCAGTATTTCACAAGAACAGCAGAGCAACCAAAAGCAATATCCCTGCTCTTAAATTGCATCTATGAGCCTGTGGCTATTTCATATGATGGCCAAAATTTTTGCAGTGTAGAGTGTTTGGATGCGGAAGGCAAGCGTTGCGTGGAAACAATAAAGCAGGATGCATACAAGAACCTGAATGATTTGAAACCATTTGAAGCAAGTTCGAGGAACACCGGTGTTGTAGGGGAAGGGCAAGGACATATGGTTCAACCATGGGCAATCGGTGGAGGCGAACAAGTAGGGTGTTCCAGTAAACAACTGCTATATGAGGCCAAATGGGAAGAGTACATGAATCCATTACAGCTTGATCAGTTTCTAATAAATTACCCCTTGAACTCTGATGGAGGTGATTATGGGGCAAAATCATTCGACTAA 1446 0.4516 MALNKRASSCNEGNDERDLQVSLCKRKAVPDTRTASGISSTNDMAFLRESKFKRVLEQVIPSMLEQAIPPMLEKVIPPMLEQMIPPMLHRSLSSPCHGFLVKRKISPAAGGGRSLQLCLMKGLPSTIFTHINIRAEDSSTLQVAVCDATVQHSKVTMGDGPSLKVQLCVLRGDFEIEDWTAEEFNSNIESQREGKGPLLKGDTVITIENGVGFFKNVEFTDNSCWTRSGKFRIGVRVLHSNSPAVADIKEGRSEPIRVKDKRGVANQKPDRPSLDDKVSCLHKISKYGQICRQLSDDGIKTVKDLLRRHTTDQASLRQIAGKYWEKIIEHAKSCEIDKNERYIYQYFTRTAEQPKAISLLLNCIYEPVAISYDGQNFCSVECLDAEGKRCVETIKQDAYKNLNDLKPFEASSRNTGVVGEGQGHMVQPWAIGGGEQVGCSSKQLLYEAKWEEYMNPLQLDQFLINYPLNSDGGDYGAKSFD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00885 481 Pfam Calmodulin binding protein central domain 273 334 IPR046830 -
Aip06g00885 481 PANTHER CALMODULIN-BINDING PROTEIN 60 G 47 412 - -
Aip06g00885 481 Pfam Calmodulin binding protein C-terminal domain 355 407 IPR046829 -
Aip06g00885 481 Pfam Calmodulin binding protein-like N-terminal domain 115 261 IPR046831 -
Aip06g00885 481 PANTHER OS02G0177800 PROTEIN 47 412 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00885 Aip-Chr6 12230250 12232727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00885 48 405 Calmodulin-binding Proteins AT5G26920 35.989 3.93e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00885 - - aip:107645945 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00885 06 12230250 12232727 Aip06g00885 06 12230250 12232727 ECH