Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00883 ATGGCACCAAACAAGAGAGGATCATTAAGCGATGAGGGTAATGATGAGAGAGACCTTCAGCTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACACCCGGTACCTCTCTTCTCTTGATTCCACCAATCACATGGCGTTGATCTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGCTGGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCTCCATGTGATGGATTATCGGTCAGGGGGCAGATTAGTCCAGCAGCTGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAGCATCACAGCAGAGGACAGTTCTCCGCTCCAGGTTGCAGTGTGTGATGCCACAATTCAGAACATCAAGGTAACGAACTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGGTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAGCAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTTTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCATCCCCTGCAGCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCGTTGGATGACAAGGTGAGTTGTCTACGTAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGCTGTCCTCGAATGGAATCAAAACTGTCAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCCACATTCCGGGGAAGTCGTGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAGTATTTCGCAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAATTTTTGCAGCCTAGAGTCTTTGAGTTCGGAAGGCAAGCGTTGGGTGGAAACTGCAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTTGATTTCCCAGTTTCTCATCAGCAAGGGCAAGGAGTAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCATATATTGGTGAAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGATGGGAAGAGTTCGTTGACGATAGCGGATGGAGCAACATCAGCATGAATGCAATACAGGTTGATCCGTATCCAAATTACTCGGACCCAGTTTACCCCTCTTACTATGTTGGAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTATCTTTGATGTTCATTATTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGGCCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA 1677 0.4645 MAPNKRGSLSDEGNDERDLQLPLCKRKAALPDTRYLSSLDSTNHMALILEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPCDGLSVRGQISPAAGRGRSLQLCLMKGLPATIFTQISITAEDSSPLQVAVCDATIQNIKVTNSLKVQLCVLKGDFESEDWTAEEFNSNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSSPAADIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLRKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGHIPGKSWEKIIEHAKSCAIDNDERYIYQYFAGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLSSEGKRWVETAKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQGVGQAQMVQASASTASYIGEGAQSVNEQVGCSSQHQVGWEEFVDDSGWSNISMNAIQVDPYPNYSDPVYPSYYVGGDYGATSSNDSFPIFDVHYSSKGGCNTVWAKIRTAVIRNVLKWAILYAAKRKPKLLVPYQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00883 558 Pfam Calmodulin binding protein C-terminal domain 351 400 IPR046829 -
Aip06g00883 558 Pfam Calmodulin binding protein-like N-terminal domain 108 250 IPR046831 -
Aip06g00883 558 PANTHER OS02G0177800 PROTEIN 28 548 IPR012416 GO:0005516
Aip06g00883 558 Pfam Calmodulin binding protein central domain 262 327 IPR046830 -
Aip06g00883 558 PANTHER CALMODULIN-BINDING PROTEIN 60 G 28 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00883 Aip-Chr6 12212735 12215469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00883 47 398 Calmodulin-binding Proteins AT5G26920 35.734 1.19e-58 199