LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g00882	ATGGTATCAAATAGGAAATTTCCCCAGGAGCAGGAAGAAGGTAATGGTGCTAAAATTCCAATTCAGAAATCAAAATGGGGAACCGCTGATCATACAAAACAACCATCCATTAGTGGCCTTAGAAATGTGATCAATGGCCATAATTCCTACGTGGAAACCTTCCTCCGAAGAGTGGTGCGAGAGGAGGTGGAACGTATAATTCAGGAACATCACCTATCTCCAAGAGGAACCGTTAATCATAATCTGGCAGGCACATCTGGAGCCAAACCCTTTCAGCTGTGTTTTATCAACAAGTTGCCTGATACAATTTTCACACTCTCTAATATAATAGCAGAGGATGAATCACCCCTTCAAATTGCTCTATTTGATGTTACATCTCAGTCTATAGTCAGTGAAGGTCCCTTATCCTCCATCAAGATAGAGATTTGTGTCCTCGATGGCGAGTTTGGTTCGAATGGCAGTGAGGATTGGACTCAAGGGGAGTTCAATGGCAGTATCTTACGCCAAAGAGATGGTAAAGGTCCATTGTTGACTGGAGATAGGTTTATTACTCTCAAGAATGGGATTGGTTCTGTCTCTAAACTTACCTTAACTGATAATTCAAGATGGTTGAGAAGCAGAAAGTTCAGATTAGGAGCCAAAGTTGTTGAATCAACTTCCTCTGGAGCAAGCATAAAGGAAGGTTCAAGTGAACCTTTCGTCGTCAAAGATAATCGCGGAGAATCTTACAAGAAACACTACCCTCCATACTTGAATGATGATATATGGCGTTTGGAGAAAATTGCAAAGGATGGAAAAATCCACAAGCGGCTCTCTTCCCAGGGAATTCACACTGTTAAGGATCTCCTGCAGCTATACACAACCGACCCATCTTCATTATATGTGAAGTGTGGCAGCATTCCAATTAAGTCATGGACAGCAATTATGAACCATGCCAAGACTTGTGTGATAAATGATCACAAGCTCTATAGCTATCGCGCGACACAACAACCTATAGTCCTGCTATTCAATTCCATCTACATCCTTGTAGGAGTACTCAACGGGCAAAATTATTGTTTACCTGATGCACTCACTCCAAAGGAGAAGAATTTGGTGGAAACCATAAAGCAGCAAGCATACAAGAATATGAATAATTTGAAATCAGTTGATGACACTTCTCCATGGAGCTGCTTCACACCAGTGGCATGTCCAAGAACAGGTCAATCTGATGTTCCAGATCAAGTCATGGCAGGTCAAGAAGAAACATGGCTAGGTTCTACACAACCCTGCACCTCTTCTTCATTTATTGATGAGGAAGTGCCAAGTTACCAAGTTTATGAAGATCCACTGCCAGAAACATGCGAAATGCTGCAGAACGGTTATACAGGAGGTGAATTCTTCTCTGGAATGTTCACTGAAGGGAATAGCTGGCAACTTAATGGATTGTCACATATTCCAGTTGTGCAAGGTGGTTGTTCAGCTGATAATTGCAGTTCAGAGATTCAATTCACAAATGATTGTTCTTGTTCACCTTACACAGCACAATGGGGGGACCAAAATGGCTATTTATTTGGTTCTTCTGATGGAGCAGAATTTACAAGTCATCCTACTTTTCTGAATTCCAATGGGGATGTATCAAACAGTGGGAAAACTAAAGCAGTGTGGTTTAAAATTGGGAATGCTATCAAATGGGTCATATCAGTTAAAAAATATGCAGCTGCCAGAAAGAATGCAGAGCTGTATTACTGTGACTTTAAGTATTAG	1743	0.4119	MVSNRKFPQEQEEGNGAKIPIQKSKWGTADHTKQPSISGLRNVINGHNSYVETFLRRVVREEVERIIQEHHLSPRGTVNHNLAGTSGAKPFQLCFINKLPDTIFTLSNIIAEDESPLQIALFDVTSQSIVSEGPLSSIKIEICVLDGEFGSNGSEDWTQGEFNGSILRQRDGKGPLLTGDRFITLKNGIGSVSKLTLTDNSRWLRSRKFRLGAKVVESTSSGASIKEGSSEPFVVKDNRGESYKKHYPPYLNDDIWRLEKIAKDGKIHKRLSSQGIHTVKDLLQLYTTDPSSLYVKCGSIPIKSWTAIMNHAKTCVINDHKLYSYRATQQPIVLLFNSIYILVGVLNGQNYCLPDALTPKEKNLVETIKQQAYKNMNNLKSVDDTSPWSCFTPVACPRTGQSDVPDQVMAGQEETWLGSTQPCTSSSFIDEEVPSYQVYEDPLPETCEMLQNGYTGGEFFSGMFTEGNSWQLNGLSHIPVVQGGCSADNCSSEIQFTNDCSCSPYTAQWGDQNGYLFGSSDGAEFTSHPTFLNSNGDVSNSGKTKAVWFKIGNAIKWVISVKKYAAARKNAELYYCDFKY	580

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g00882	580	MobiDBLite	consensus disorder prediction	1	40	-	-
	Aip06g00882	580	Pfam	Calmodulin binding protein-like N-terminal domain	91	238	IPR046831	-
	Aip06g00882	580	Pfam	Calmodulin binding protein central domain	251	315	IPR046830	-
	Aip06g00882	580	Pfam	Calmodulin binding protein C-terminal domain	321	381	IPR046829	-
	Aip06g00882	580	PANTHER	OS02G0177800 PROTEIN	1	571	IPR012416	GO:0005516
	Aip06g00882	580	PANTHER	CALMODULIN-BINDING PROTEIN	1	571	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g00882	Aip-Chr6	12184722	12187134	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip06g00882	49	425	Calmodulin-binding Proteins	AT5G57580	40.201	6.04e-87	281

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g00882	-		-	gmx:100805759	627.861